RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PPM1JQ5JR12 505 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 ZNF549Q6P9A3 640 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 CMC1Q7Z7K0 106 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 OMDQ99983 421 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 BRD9Q9H8M2 597 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 ZFYVE1Q9HBF4 777 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 BPIFA1Q9NP55 256 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 CATSPERZQ9NTU4 200 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 TXNDC16Q9P2K2 825 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 LRRK1Q38SD2 2015 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 SHISA7A6NL88 538 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 TOP3BO95985 862 aaKnown RBP12.7□□□□□ -0.38
TRIM39-204ENST00000396548 CA5AP35218 305 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 TNFRSF4P43489 277 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 KIR2DL1P43626 348 aaPredicted RBP12.7□□□□□ -0.38
TRIM39-204ENST00000396548 CD151P48509 253 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 CDKN1CP49918 316 aaPredicted RBP12.7□□□□□ -0.38
TRIM39-204ENST00000396548 ZNF805Q5CZA5 627 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 LDB1Q86U70 411 aaPredicted RBP12.7□□□□□ -0.38
TRIM39-204ENST00000396548 CEP97Q8IW35 865 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 ANKRD42Q8N9B4 389 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 OR6P1Q8NGX9 317 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 AGAP14A8MT82 685 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 BNIP3LO60238 219 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 GMPRP36959 345 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 ST8SIA6P61647 398 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 FNDC3BQ53EP0 1204 aaKnown RBP12.7□□□□□ -0.38
TRIM39-204ENST00000396548 EGFLAMQ63HQ2 1017 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 SUGP1Q8IWZ8 645 aaKnown RBP12.7□□□□□ -0.38
TRIM39-204ENST00000396548 PIANPQ8IYJ0 282 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 NDUFAF2Q8N183 169 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 ATXN7L3BQ96GX2 97 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 ACOX2Q99424 681 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 PCMTD2Q9NV79 361 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 SLC8A2Q9UPR5 921 aa12.7□□□□□ -0.38
TRIM39-204ENST00000396548 TRBV5-4A0A0C4DH59 114 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 C1orf232A0A0U1RR37 186 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 TBC1D3BA6NDS4 549 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 MPOP05164 745 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 SLC35E2BP0CK96 405 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 HLA-EP13747 358 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 BPIP17213 487 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 INSCQ1MX18 579 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 PREPLQ4J6C6 727 aaPredicted RBP12.69□□□□□ -0.38
TRIM39-204ENST00000396548 RBM20Q5T481 1227 aaKnown RBP12.69□□□□□ -0.38
TRIM39-204ENST00000396548 PSAPL1Q6NUJ1 521 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 TXNDC11Q6PKC3 985 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 STK40Q8N2I9 435 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 LPGAT1Q92604 370 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 CDX2Q99626 313 aaPredicted RBP12.69□□□□□ -0.38
TRIM39-204ENST00000396548 MLXIPLQ9NP71 852 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 INTS10Q9NVR2 710 aaKnown RBP12.69□□□□□ -0.38
TRIM39-204ENST00000396548 FAM95CA0A1B0GW59 222 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 STX7O15400 261 aaKnown RBP12.69□□□□□ -0.38
TRIM39-204ENST00000396548 C1SP09871 688 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 MC4RP32245 332 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 RECQLP46063 649 aaPredicted RBP12.69□□□□□ -0.38
TRIM39-204ENST00000396548 METAP1P53582 386 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 RALGDSQ12967 914 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 LRRC66Q68CR7 880 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 RGS9BPQ6ZS82 235 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 USP45Q70EL2 814 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 SLC41A1Q8IVJ1 513 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 TMEM151AQ8N4L1 468 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 SLC44A3Q8N4M1 653 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 MGARPQ8TDB4 240 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 GUCD1Q96NT3 240 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 TCF12Q99081 682 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 OLFM1Q99784 485 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 GPR63Q9BZJ6 419 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 EPN3Q9H201 632 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 KCNK12Q9HB15 430 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 IL26Q9NPH9 171 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 NKIRAS1Q9NYS0 192 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 COPEO14579 308 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 GM2AP17900 193 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 KCNA5P22460 613 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 CLCN5P51795 746 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 PGGT1BP53609 377 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 PTPN5P54829 565 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 POLR2LP62875 67 aaKnown RBP12.69□□□□□ -0.38
TRIM39-204ENST00000396548 POU4F1Q01851 419 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 ILF2Q12905 390 aaKnown RBP12.69□□□□□ -0.38
TRIM39-204ENST00000396548 MRNIPQ6NTE8 343 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 PLD6Q8N2A8 252 aaKnown RBP12.69□□□□□ -0.38
TRIM39-204ENST00000396548 PRSS16Q9NQE7 514 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 B4GALT6Q9UBX8 382 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 MED16Q9Y2X0 877 aa12.69□□□□□ -0.38
TRIM39-204ENST00000396548 BRWD1Q9NSI6 2320 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 C16orf96A6NNT2 1141 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 APODP05090 189 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 C2P06681 752 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 C7P10643 843 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 SUOXP51687 545 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 IRF9Q00978 393 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 SETMARQ53H47 684 aaPredicted RBP12.68□□□□□ -0.38
TRIM39-204ENST00000396548 GPR153Q6NV75 609 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 LVRNQ6Q4G3 990 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 DPPA4Q7L190 304 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 PARS2Q7L3T8 475 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms