RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ZNF57Q68EA5 555 aaPredicted RBP8.43□□□□□ -1.06
NDE1-202ENST00000396355 UXS1Q8NBZ7 420 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 C19orf18Q8NEA5 215 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 KCNS3Q9BQ31 491 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 NUFIP1Q9UHK0 495 aaKnown RBP8.43□□□□□ -1.06
NDE1-202ENST00000396355 U3KQV3 271 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 POLR1CO15160 346 aaPredicted RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 HOXC11O43248 304 aaPredicted RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 RNASEH2AO75792 299 aaKnown RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 VAPBO95292 243 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 CYBBP04839 570 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 ICAM1P05362 532 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 CYP3A5P20815 502 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 RPS3P23396 243 aaKnown RBP eCLIP8.42□□□□□ -1.06
NDE1-202ENST00000396355 CFL1P23528 166 aaKnown RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 POLD2P49005 469 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 PSME3P61289 254 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 QPRTQ15274 297 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 POU4F3Q15319 338 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 FAM110CQ1W6H9 321 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 INAVAQ3KP66 663 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 DDI2Q5TDH0 399 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 PLET1Q6UQ28 207 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 ZNF517Q6ZMY9 492 aaPredicted RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 SYDE1Q6ZW31 735 aaPredicted RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 FIBCD1Q8N539 461 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 BSNDQ8WZ55 320 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 DDX1Q92499 740 aaKnown RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 CEP170P1Q96L14 293 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 ILKAPQ9H0C8 392 aaPredicted RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 ERVMER34-1Q9H9K5 563 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 KIAA1522Q9P206 1035 aaPredicted RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 TRMT6Q9UJA5 497 aaKnown RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 EFCAB10A6NFE3 127 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 E5RJQ4 531 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 H3BM21 787 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 SCAMP1O15126 338 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 PRPF4O43172 522 aaKnown RBP eCLIP8.42□□□□□ -1.06
NDE1-202ENST00000396355 DNAJB5O75953 348 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 DLDP09622 509 aaKnown RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 CYP4B1P13584 511 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 RFX1P22670 979 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 GPC1P35052 558 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 SOX6P35712 828 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 NLRP11P59045 1033 aaKnown RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 PFKPQ01813 784 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 TRAP1Q12931 704 aaKnown RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 IKBKEQ14164 716 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 TCEAL1Q15170 157 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 MGAT5BQ3V5L5 792 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 PLEKHH3Q7Z736 793 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 AMER2Q8N7J2 671 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 XXYLT1Q8NBI6 393 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 TP53I13Q8NBR0 393 aaPredicted RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 DEDD2Q8WXF8 326 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 SHC3Q92529 594 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 FAM149B1Q96BN6 582 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 NT5C1BQ96P26 610 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 MCMBPQ9BTE3 642 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 C9orf16Q9BUW7 83 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 ARNT2Q9HBZ2 717 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 ING3Q9NXR8 418 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 KIF17Q9P2E2 1029 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 DNAH12Q6ZR08 3092 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 H7C2Y5 167 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 EI24O14681 340 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 CST8O60676 142 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 PLA2G6O60733 806 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 AVILO75366 819 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 PAHP00439 452 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 LDLRP01130 860 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 GLAP06280 429 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 PIK3R1P27986 724 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 ELK4P28324 431 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 SNRNP35Q16560 246 aaKnown RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 TREML2Q5T2D2 321 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 FAM91A1Q658Y4 838 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 SLC26A11Q86WA9 606 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 SPPL2CQ8IUH8 684 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 C8orf59Q8N0T1 100 aaPredicted RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 ATP6V0D2Q8N8Y2 350 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 ARRDC4Q8NCT1 418 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 CLHC1Q8NHS4 586 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 TAS1R2Q8TE23 839 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 LRRN4Q8WUT4 740 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 APOL4Q9BPW4 351 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 C17orf62Q9BQA9 187 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 TASP1Q9H6P5 420 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.42□□□□□ -1.06
NDE1-202ENST00000396355 IL37Q9NZH6 218 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 UBIAD1Q9Y5Z9 338 aa8.42□□□□□ -1.06
NDE1-202ENST00000396355 PNMA8CA0A1B0GUJ8 204 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 MUSKO15146 869 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 NCAM2O15394 837 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 DENRO43583 198 aaKnown RBP8.41□□□□□ -1.06
NDE1-202ENST00000396355 LYPLA2O95372 231 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 IL7RP16871 459 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 CXCR2P25025 360 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 GP5P40197 560 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 LIG4P49917 911 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms