RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 WISP3O95389 354 aaPredicted RBP12.14□□□□□ -0.47
ITGB1-202ENST00000396033 GM2AP17900 193 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 TFEBP19484 476 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 NCF2P19878 526 aaPredicted RBP12.14□□□□□ -0.47
ITGB1-202ENST00000396033 SEL1L3Q68CR1 1132 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 TRIM67Q6ZTA4 783 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 OR6K2Q8NGY2 324 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 MCUR1Q96AQ8 359 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 FAM136AQ96C01 138 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 ALG9Q9H6U8 611 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 BPIFA1Q9NP55 256 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 MAN1C1Q9NR34 630 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 HCFC1R1Q9NWW0 138 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 DNMT3BQ9UBC3 853 aaKnown RBP12.14□□□□□ -0.47
ITGB1-202ENST00000396033 FKBPLQ9UIM3 349 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 PCDHB9Q9Y5E1 797 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 LCHNA4D1U4 455 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 STX7O15400 261 aaKnown RBP12.13□□□□□ -0.47
ITGB1-202ENST00000396033 EZRP15311 586 aaKnown RBP12.13□□□□□ -0.47
ITGB1-202ENST00000396033 DNAJB13P59910 316 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 LMAN2Q12907 356 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 PTPRRQ15256 657 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 PIWIL4Q7Z3Z4 852 aaKnown RBP12.13□□□□□ -0.47
ITGB1-202ENST00000396033 LSMEM2Q8N112 164 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 MAPK15Q8TD08 544 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 CCDC126Q96EE4 140 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 AARSD1Q9BTE6 412 aaKnown RBP12.13□□□□□ -0.47
ITGB1-202ENST00000396033 SLC46A2Q9BY10 475 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 TAS2R1Q9NYW7 299 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 ZDHHC2Q9UIJ5 367 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 CLEC4EQ9ULY5 219 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 A8MT66 165 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 B2RBV5 119 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 NPHS1O60500 1241 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 NDUFS3O75489 264 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 AOC1P19801 751 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 GCKP35557 465 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 SLC26A3P40879 764 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 HK2P52789 917 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 AP1S1P61966 158 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 PDAP1Q13442 181 aaKnown RBP12.13□□□□□ -0.47
ITGB1-202ENST00000396033 RALGPS1Q5JS13 557 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 MYO19Q96H55 970 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 PPP1R36Q96LQ0 422 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 CCDC68Q9H2F9 335 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 E9PBE3 544 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 MATN2O00339 956 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 NEMP1O14524 444 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 HDAC3O15379 428 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 GSC2O15499 205 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 SMAD6O43541 496 aaKnown RBP12.13□□□□□ -0.47
ITGB1-202ENST00000396033 KLHL41O60662 606 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 HSPA8P11142 646 aaKnown RBP12.13□□□□□ -0.47
ITGB1-202ENST00000396033 KCNA5P22460 613 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 MC4RP32245 332 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 CCR2P41597 374 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 PLK1P53350 603 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 RYBPQ8N488 228 aaPredicted RBP12.13□□□□□ -0.47
ITGB1-202ENST00000396033 PAF1Q8N7H5 531 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 RAD9AQ99638 391 aa12.13□□□□□ -0.47
ITGB1-202ENST00000396033 KIAA1522Q9P206 1035 aaPredicted RBP12.13□□□□□ -0.47
ITGB1-202ENST00000396033 A0A0U1RQS6 177 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 TLL1O43897 1013 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 IPO13O94829 963 aaKnown RBP12.12□□□□□ -0.47
ITGB1-202ENST00000396033 RHOBTB1O94844 696 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 CYBBP04839 570 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 FMO4P31512 558 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 CD70P32970 193 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 MXRA7P84157 204 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 MPP7Q5T2T1 576 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 ARMC12Q5T9G4 340 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 LPGAT1Q92604 370 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 ACDQ96AP0 544 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 TCF7L2Q9NQB0 619 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 HACD3Q9P035 362 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 GOLGA8QA0A0J9YX86 632 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 GOLGA8OA6NCC3 632 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 GOLGA8NF8WBI6 632 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 SRP72O76094 671 aaKnown RBP12.12□□□□□ -0.47
ITGB1-202ENST00000396033 CTPS1P17812 591 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 TIAL1Q01085 375 aaKnown RBP eCLIP12.12□□□□□ -0.476e-6■■■■□ 21
ITGB1-202ENST00000396033 TTC30BQ8N4P2 665 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 USP13Q92995 863 aaPredicted RBP12.12□□□□□ -0.47
ITGB1-202ENST00000396033 EXT2Q93063 718 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 PHF21BQ96EK2 531 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 OR52B2Q96RD2 323 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 POPDC3Q9HBV1 291 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 GTSE1Q9NYZ3 720 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 EVLQ9UI08 416 aaPredicted RBP12.12□□□□□ -0.47
ITGB1-202ENST00000396033 ARHGAP26Q9UNA1 814 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 ZNF711Q9Y462 761 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 IRAK3Q9Y616 596 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 F8W8V4 182 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 ZBTB14O43829 449 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 FZD6O60353 706 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 ZNF37AP17032 561 aaPredicted RBP12.12□□□□□ -0.47
ITGB1-202ENST00000396033 PSMA3P25788 255 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 SERPINB5P36952 375 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 CDKN1CP49918 316 aaPredicted RBP12.12□□□□□ -0.47
ITGB1-202ENST00000396033 SUOXP51687 545 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms