RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 RNASEH1O60930 286 aaKnown RBP20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 MT-ND3P03897 115 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 ITGA2BP08514 1039 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 LHCGRP22888 699 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 MC4RP32245 332 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 PSMD8P48556 350 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 METAP1P53582 386 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 FASTKD1Q53R41 847 aaKnown RBP20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 FAM46CQ5VWP2 391 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 MRNIPQ6NTE8 343 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 ERAP2Q6P179 960 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 KIAA0408Q6ZU52 694 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 TRMT11Q7Z4G4 463 aaKnown RBP20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 CNPY4Q8N129 248 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 IL17RCQ8NAC3 791 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 ATXN7L3BQ96GX2 97 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 C19orf43Q9BQ61 176 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 ACTL7BQ9Y614 415 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 KLF8O95600 359 aaPredicted RBP20.39■□□□□ 0.86
VCPKMT-202ENST00000395860 AHSGP02765 367 aa20.39■□□□□ 0.86
VCPKMT-202ENST00000395860 CHRM1P11229 460 aaPredicted RBP20.39■□□□□ 0.86
VCPKMT-202ENST00000395860 ZNF30P17039 623 aa20.39■□□□□ 0.86
VCPKMT-202ENST00000395860 LIMK2P53671 638 aa20.39■□□□□ 0.86
VCPKMT-202ENST00000395860 MRPS21P82921 87 aaKnown RBP20.39■□□□□ 0.86
VCPKMT-202ENST00000395860 STARD3Q14849 445 aa20.39■□□□□ 0.86
VCPKMT-202ENST00000395860 FBXL19Q6PCT2 694 aa20.39■□□□□ 0.86
VCPKMT-202ENST00000395860 CILP2Q8IUL8 1156 aa20.39■□□□□ 0.86
VCPKMT-202ENST00000395860 GPR150Q8NGU9 434 aa20.39■□□□□ 0.86
VCPKMT-202ENST00000395860 GABRG3Q99928 467 aa20.39■□□□□ 0.86
VCPKMT-202ENST00000395860 HMX2A2RU54 273 aa20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 PPP2R2AP63151 447 aa20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 PTSQ03393 145 aa20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 MLF2Q15773 248 aaPredicted RBP20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 FBXO43Q4G163 708 aa20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 SDCCAG8Q86SQ7 713 aaPredicted RBP20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 TXNDC5Q8NBS9 432 aaKnown RBP20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 SGSM3Q96HU1 749 aa20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 VPS39Q96JC1 886 aa20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 SMC6Q96SB8 1091 aa20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 RSPH9Q9H1X1 276 aaPredicted RBP20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 RHOJQ9H4E5 214 aa20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 FBXO6Q9NRD1 293 aaPredicted RBP20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 MARCH4Q9P2E8 410 aaPredicted RBP20.39■□□□□ 0.85
VCPKMT-202ENST00000395860 SHISA7A6NL88 538 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 MAN2B1O00754 1011 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 HOXB2P14652 356 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 BRAFP15056 766 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 CREB1P16220 341 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 OGNP20774 298 aaKnown RBP20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 CD72P21854 359 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 GABRB3P28472 473 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 ABCG1P45844 678 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 ZP2Q05996 745 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 PEX6Q13608 980 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 ZRANB3Q5FWF4 1079 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 DPPA4Q7L190 304 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 LDB1Q86U70 411 aaPredicted RBP20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 ZC3HC1Q86WB0 502 aaKnown RBP20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 C4orf33Q8N1A6 199 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 SELENOSQ9BQE4 189 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 MCMBPQ9BTE3 642 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 SLC30A1Q9Y6M5 507 aa20.38■□□□□ 0.85
VCPKMT-202ENST00000395860 BPTFQ12830 3046 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 PLK4O00444 970 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 ADAM23O75077 832 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 C1SP09871 688 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 ADRB3P13945 408 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 BPIP17213 487 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 KRT4P19013 534 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 FOXN2P32314 431 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 SPAM1P38567 509 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 LEPRP48357 1165 aaKnown RBP20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 CD151P48509 253 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 NEK3P51956 506 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 SATB1Q01826 763 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 DNAJC3Q13217 504 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 ERN2Q76MJ5 926 aaKnown RBP20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 GALNT7Q86SF2 657 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 CBARPQ8N350 705 aaPredicted RBP20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 ARFGAP2Q8N6H7 521 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 SERAC1Q96JX3 654 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 KLF6Q99612 283 aaPredicted RBP20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 PKD2L2Q9NZM6 624 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 APPL1Q9UKG1 709 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 NDRG2Q9UN36 371 aaKnown RBP20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 SORCS3Q9UPU3 1222 aa20.37■□□□□ 0.85
VCPKMT-202ENST00000395860 GOLGA8RI6L899 631 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 HAUS5O94927 633 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 PMLP29590 882 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 MMP12P39900 470 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 SUOXP51687 545 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 XIAPP98170 497 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 ELP6Q0PNE2 266 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 RALGDSQ12967 914 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 CCINQ13939 588 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 SEMA3AQ14563 771 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 CST6Q15828 149 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 KIAA1211LQ6NV74 962 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 FAM151BQ6UXP7 276 aa20.36■□□□□ 0.85
VCPKMT-202ENST00000395860 CACUL1Q86Y37 369 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms