RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 SCYL2Q6P3W7 929 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 TMEM71Q6P5X7 295 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 ZNF677Q86XU0 584 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 APOBEC4Q8WW27 367 aaKnown RBP15.8■□□□□ 0.12
SNCA-205ENST00000394991 PCDHB18PQ96TA0 734 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 CTRCQ99895 268 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 TUBGCP2Q9BSJ2 902 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 SLC39A8Q9C0K1 460 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 KCNK4Q9NYG8 393 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 KIAA1468Q9P260 1216 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 PDP2Q9P2J9 529 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 TP53TG5Q9Y2B4 290 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 SHANK1Q9Y566 2161 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 FGF10O15520 208 aaPredicted RBP15.79■□□□□ 0.12
SNCA-205ENST00000394991 GFPT2O94808 682 aa15.79■□□□□ 0.12
SNCA-205ENST00000394991 PAPOLAP51003 745 aaKnown RBP15.79■□□□□ 0.12
SNCA-205ENST00000394991 CDK3Q00526 305 aa15.79■□□□□ 0.12
SNCA-205ENST00000394991 MC2RQ01718 297 aa15.79■□□□□ 0.12
SNCA-205ENST00000394991 KLRB1Q12918 225 aa15.79■□□□□ 0.12
SNCA-205ENST00000394991 STARD8Q92502 1023 aa15.79■□□□□ 0.12
SNCA-205ENST00000394991 KIAA1143Q96AT1 154 aaPredicted RBP15.79■□□□□ 0.12
SNCA-205ENST00000394991 TEFMQ96QE5 360 aaKnown RBP15.79■□□□□ 0.12
SNCA-205ENST00000394991 DPYSL5Q9BPU6 564 aa15.79■□□□□ 0.12
SNCA-205ENST00000394991 SELENOOQ9BVL4 669 aa15.79■□□□□ 0.12
SNCA-205ENST00000394991 GANQ9H2C0 597 aa15.79■□□□□ 0.12
SNCA-205ENST00000394991 LRRC4CQ9HCJ2 640 aa15.79■□□□□ 0.12
SNCA-205ENST00000394991 APMAPQ9HDC9 416 aa15.79■□□□□ 0.12
SNCA-205ENST00000394991 CHMP5Q9NZZ3 219 aa15.79■□□□□ 0.12
SNCA-205ENST00000394991 TEP1Q99973 2627 aaKnown RBP15.79■□□□□ 0.12
SNCA-205ENST00000394991 TCRBV5S1A1TA0A578 114 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 PALMO75781 387 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 IVLP07476 585 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 UNGP13051 313 aaPredicted RBP15.78■□□□□ 0.12
SNCA-205ENST00000394991 MAP4P27816 1152 aaKnown RBP15.78■□□□□ 0.12
SNCA-205ENST00000394991 ACTR1BP42025 376 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 NDST2P52849 883 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 MLLT10P55197 1068 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 ACTR1AP61163 376 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 TPD52L1Q16890 204 aaPredicted RBP15.78■□□□□ 0.12
SNCA-205ENST00000394991 SNAP47Q5SQN1 464 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 ARHGAP36Q6ZRI8 547 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 HSD11B1LQ7Z5J1 315 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 ARHGAP12Q8IWW6 846 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 PAF1Q8N7H5 531 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 DTD2Q96FN9 168 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 CINPQ9BW66 212 aaPredicted RBP15.78■□□□□ 0.12
SNCA-205ENST00000394991 GPATCH2LQ9NWQ4 482 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 SLC17A4Q9Y2C5 497 aa15.78■□□□□ 0.12
SNCA-205ENST00000394991 TMEM184BQ9Y519 407 aaPredicted RBP15.78■□□□□ 0.12
SNCA-205ENST00000394991 MRPS18BQ9Y676 258 aaKnown RBP15.78■□□□□ 0.12
SNCA-205ENST00000394991 ESPL1Q14674 2120 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 HIVEP3Q5T1R4 2406 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 CENPEQ02224 2701 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 TTC24A2A3L6 582 aaPredicted RBP15.77■□□□□ 0.12
SNCA-205ENST00000394991 A8MU76 341 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 STK17BO94768 372 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 HEXIM1O94992 359 aaKnown RBP15.77■□□□□ 0.12
SNCA-205ENST00000394991 DLGAP3O95886 979 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 KRT7P08729 469 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 LHCGRP22888 699 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 VIPR1P32241 457 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 ETV3P41162 512 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 UQCRFS1P47985 274 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 TPI1P60174 286 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 POLR2LP62875 67 aaKnown RBP15.77■□□□□ 0.12
SNCA-205ENST00000394991 GPLD1P80108 840 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 ABHD18Q0P651 414 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 DENND2CQ68D51 928 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 C16orf46Q6P387 395 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 DOK6Q6PKX4 331 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 ARHGAP22Q7Z5H3 698 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 FAM114A1Q8IWE2 563 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 CBARPQ8N350 705 aaPredicted RBP15.77■□□□□ 0.12
SNCA-205ENST00000394991 C3orf20Q8ND61 904 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 SLC37A2Q8TED4 501 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 SCARF2Q96GP6 870 aaPredicted RBP15.77■□□□□ 0.12
SNCA-205ENST00000394991 EFHD1Q9BUP0 239 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 ZMYND15Q9H091 742 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 ADAM22Q9P0K1 906 aa15.77■□□□□ 0.12
SNCA-205ENST00000394991 PLEKHB1Q9UF11 243 aaPredicted RBP15.77■□□□□ 0.12
SNCA-205ENST00000394991 TRBV23OR9-2A0A075B6M9 112 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 ARHGAP42A6NI28 874 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 SIGLEC16A6NMB1 481 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 EML2O95834 649 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 SOD1P00441 154 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 TCN2P20062 427 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 F8A1P23610 371 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 ERCC5P28715 1186 aaPredicted RBP15.76■□□□□ 0.11
SNCA-205ENST00000394991 FASLGP48023 281 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 SCNN1BP51168 640 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 ZNF143P52747 638 aaPredicted RBP15.76■□□□□ 0.11
SNCA-205ENST00000394991 AP1S1P61966 158 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 RPL7AP62424 266 aaKnown RBP15.76■□□□□ 0.11
SNCA-205ENST00000394991 NSUN2Q08J23 767 aaKnown RBP eCLIP15.76■□□□□ 0.11
SNCA-205ENST00000394991 PTPRRQ15256 657 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 CAMK4Q16566 473 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 CRTC2Q53ET0 693 aaPredicted RBP15.76■□□□□ 0.11
SNCA-205ENST00000394991 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.76■□□□□ 0.11
SNCA-205ENST00000394991 RAET1GQ6H3X3 334 aa15.76■□□□□ 0.11
SNCA-205ENST00000394991 CEACAM20Q6UY09 585 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms