RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 LRRN4Q8WUT4 740 aa5.7□□□□□ -1.5
RFFL-202ENST00000394597 SARS2Q9NP81 518 aaKnown RBP5.7□□□□□ -1.5
RFFL-202ENST00000394597 MAN1C1Q9NR34 630 aa5.7□□□□□ -1.5
RFFL-202ENST00000394597 ATP6V1HQ9UI12 483 aa5.7□□□□□ -1.5
RFFL-202ENST00000394597 SLC39A10Q9ULF5 831 aa5.7□□□□□ -1.5
RFFL-202ENST00000394597 MRPL42Q9Y6G3 142 aaKnown RBP5.7□□□□□ -1.5
RFFL-202ENST00000394597 FOCADQ5VW36 1801 aa5.7□□□□□ -1.5
RFFL-202ENST00000394597 SMCHD1A6NHR9 2005 aa5.7□□□□□ -1.5
RFFL-202ENST00000394597 MEIS3P2A8K0S8 358 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 EIF3FO00303 357 aaPredicted RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 PITPNM1O00562 1244 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 WBP4O75554 376 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 SERPINE1P05121 402 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ACRP10323 421 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TCF4P15884 667 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 PSMB9P28065 219 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SLC11A1P49279 550 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 GNG2P59768 71 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 PEX6Q13608 980 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 CA9Q16790 459 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 MTX3Q5HYI7 312 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 DEPDC1Q5TB30 811 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 BROXQ5VW32 411 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SEL1L3Q68CR1 1132 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 KYAT3Q6YP21 454 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 SLC39A5Q6ZMH5 540 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 DENND1CQ8IV53 801 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 MARVELD2Q8N4S9 558 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 PCDH20Q8N6Y1 951 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 GRPEL2Q8TAA5 225 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 RIN3Q8TB24 985 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 HDAC2Q92769 488 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 EXT2Q93063 718 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 NTAN1Q96AB6 310 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 BIRC8Q96P09 236 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TBL1YQ9BQ87 522 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 C9orf16Q9BUW7 83 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 HERC2P3Q9BVR0 1158 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 RHOBTB2Q9BYZ6 727 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ASPSCR1Q9BZE9 553 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 EPB41L1Q9H4G0 881 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 DYRK4Q9NR20 520 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ASAH2Q9NR71 780 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ARHGEF4Q9NR80 690 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SACM1LQ9NTJ5 587 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SAGE1Q9NXZ1 904 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 UBA2Q9UBT2 640 aaPredicted RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 ADAMTS6Q9UKP5 1117 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 PRPF19Q9UMS4 504 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 KLHL20Q9Y2M5 609 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 RWDD3Q9Y3V2 267 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 PKP3Q9Y446 797 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ST14Q9Y5Y6 855 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 PMF1-BGLAPU3KQ54 211 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TRAV19A0A0A6YYK7 116 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 FAM155AB1AL88 458 aaPredicted RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 C9IYK1 514 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TOR1BO14657 336 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TSPAN4O14817 238 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ITIH1P19827 911 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SLC5A2P31639 672 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 NUMBP49757 651 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SLC25A11Q02978 314 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 UBE3AQ05086 875 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 DNASE1L3Q13609 305 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SLC12A1Q13621 1099 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 MRNIPQ6NTE8 343 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 DPY19L2P1Q6NXN4 242 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 DUS1LQ6P1R4 473 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 DCDC5Q6ZRR9 648 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TMEM26Q6ZUK4 368 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 C16orf59Q7L2K0 433 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 STRA8Q7Z7C7 330 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 DHFR2Q86XF0 187 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 DDIASQ8IXT1 998 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 UBASH3BQ8TF42 649 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 NCSTNQ92542 709 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 RORBQ92753 470 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 PROX1Q92786 737 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ISOC1Q96CN7 298 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ADGRE3Q9BY15 652 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 PRKD2Q9BZL6 878 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ACSS3Q9H6R3 686 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SCN3BQ9NY72 215 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 MPP6Q9NZW5 540 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 DCDC2Q9UHG0 476 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 CYTH4Q9UIA0 394 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SLC38A8A6NNN8 435 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TRIM24O15164 1050 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 CCNT2O60583 730 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 SERPINB7O75635 380 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TCEA3O75764 348 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 LRIG2O94898 1065 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 EPN2O95208 641 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 BMP10O95393 424 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TFAP2AP05549 437 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 RPL17P18621 184 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 NFKB1P19838 968 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ENDOUP21128 410 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 PBX3P40426 434 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms