RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 AKTIPQ9H8T0 292 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 SP110Q9HB58 689 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 MARCH5Q9NX47 278 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 GALPQ9UBC7 116 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 EGFL7Q9UHF1 273 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 HEMK1Q9Y5R4 338 aaPredicted RBP13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 GREB1Q4ZG55 1949 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 FAM149AA5PLN7 773 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 CCDC160A6NGH7 325 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 PQBP1O60828 265 aaKnown RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 GOT2P00505 430 aaKnown RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 ATP6V1B2P21281 511 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 ZNF135P52742 658 aaPredicted RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 TRIM25Q14258 630 aaKnown RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 MON1AQ86VX9 555 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 FAM126BQ8IXS8 530 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 PTGR2Q8N8N7 351 aaPredicted RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 DCBLD1Q8N8Z6 715 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 SLAIN1Q8ND83 568 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 NUDT8Q8WV74 236 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 EME1Q96AY2 570 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 TMIGD2Q96BF3 282 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 EXOC2Q96KP1 924 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 MRM3Q9HC36 420 aaKnown RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 LRFN2Q9ULH4 789 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 SCML2Q9UQR0 700 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 FNDC3AQ9Y2H6 1198 aaKnown RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 AP4S1Q9Y587 144 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 DNAJC15Q9Y5T4 150 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 CCDC162PA2VCL2 907 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 AP3B1O00203 1094 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 NR5A2O00482 541 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 TPST1O60507 370 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 CLPTM1O96005 669 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 CYP2C18P33260 490 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 CDKN1CP49918 316 aaPredicted RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 TBX4P57082 545 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 RFTN1Q14699 578 aaPredicted RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 PFKFB4Q16877 469 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 UGT3A2Q3SY77 523 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 VPS26BQ4G0F5 336 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 RTP2Q5QGT7 225 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 TIGD7Q6NT04 549 aaPredicted RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 LARP4Q71RC2 724 aaKnown RBP eCLIP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 HERC6Q8IVU3 1022 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 LZTR1Q8N653 840 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 ASB9Q96DX5 294 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 SLC39A13Q96H72 371 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 MPP4Q96JB8 637 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 SERPINB11Q96P15 392 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 SEMA3CQ99985 751 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 TUBB1Q9H4B7 451 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 PRDM5Q9NQX1 630 aaPredicted RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 DDX18Q9NVP1 670 aaKnown RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 PHF24Q9UPV7 400 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 FNDC1Q4ZHG4 1894 aaPredicted RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 MROH6A6NGR9 719 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 SYN3O14994 580 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 WISP3O95389 354 aaPredicted RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 SNRPB2P08579 225 aaKnown RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 BMP1P13497 986 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 DNAJB2P25686 324 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 PCSK6P29122 969 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 CLCN5P51795 746 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 ATN1P54259 1190 aaPredicted RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 TAS1R1Q7RTX1 841 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 TTC16Q8NEE8 873 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 ADCY4Q8NFM4 1077 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 ZFP28Q8NHY6 868 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 FBXO32Q969P5 355 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 FUBP3Q96I24 572 aaKnown RBP eCLIP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 C8orf48Q96LL4 319 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 UNC93B1Q9H1C4 597 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 MAP10Q9P2G4 905 aa13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 TSR3Q9UJK0 312 aaKnown RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 CNOT6Q9ULM6 557 aaKnown RBP13.48□□□□□ -0.25
GTF2F1-201ENST00000394456 MIA3Q5JRA6 1907 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 A0A0D9SEW6 157 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 PIP5K1BO14986 540 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 SLC22A2O15244 555 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 CDK14O94921 469 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 ALDH2P05091 517 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 LINC00032P0C843 101 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 CAPN3P20807 821 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 IMPDH1P20839 514 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 PRDX3P30048 256 aaKnown RBP13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 CDH15P55291 814 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 CCL23P55773 120 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 LSAMPQ13449 338 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 SQLEQ14534 574 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 AP1ARQ63HQ0 302 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 ZFP1Q6P2D0 407 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 KLHDC10Q6PID8 442 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 RNF19BQ6ZMZ0 732 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 TRPC4APQ8TEL6 797 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 PTCD2Q8WV60 388 aaKnown RBP13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 CANT1Q8WVQ1 401 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 C19orf60Q96EN9 201 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms