RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PTPRNQ16849 979 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 CCDC153Q494R4 210 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 FNDC3BQ53EP0 1204 aaKnown RBP8.63□□□□□ -1.03
TDP1-203ENST00000393454 ARSIQ5FYB1 569 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 LRRC73Q5JTD7 316 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 HECTD2Q5U5R9 776 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 PARM1Q6UWI2 310 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 RGS9BPQ6ZS82 235 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 USP45Q70EL2 814 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 GALNT7Q86SF2 657 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 ETFBKMTQ8IXQ9 262 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 CCDC197Q8NCU1 140 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 FRS2Q8WU20 508 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 KCTD4Q8WVF5 259 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 NXPE3Q969Y0 559 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 THOC1Q96FV9 657 aaKnown RBP8.63□□□□□ -1.03
TDP1-203ENST00000393454 GTSE1Q9NYZ3 720 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 IL17CQ9P0M4 197 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 SLC30A1Q9Y6M5 507 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 DOCK8Q8NF50 2099 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 BPTFQ12830 3046 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 A0A087X1B8 175 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 TBC1D3BA6NDS4 549 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 BIRC5O15392 142 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 LEFTY1O75610 366 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 PROCP04070 461 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 FMO4P31512 558 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 MTHFRP42898 656 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 GLRBP48167 497 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 STC1P52823 247 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 POLR2LP62875 67 aaKnown RBP8.63□□□□□ -1.03
TDP1-203ENST00000393454 FCHO2Q0JRZ9 810 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 PEX6Q13608 980 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 ATG16L1Q676U5 607 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 PSAPL1Q6NUJ1 521 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 FAM151BQ6UXP7 276 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 PIGWQ7Z7B1 504 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 CLEC14AQ86T13 490 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 TBC1D1Q86TI0 1168 aaPredicted RBP8.63□□□□□ -1.03
TDP1-203ENST00000393454 TSPAN33Q86UF1 283 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 PLPP6Q8IY26 295 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 SPATA6LQ8N4H0 392 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 ANKS4BQ8N8V4 417 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 FGF14Q92915 247 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 EID2BQ96D98 161 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 OLFM1Q99784 485 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 TSSK1BQ9BXA7 367 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 UNKQ9C0B0 810 aaKnown RBP8.63□□□□□ -1.03
TDP1-203ENST00000393454 CCDC68Q9H2F9 335 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 POMKQ9H5K3 350 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 NMRAL1Q9HBL8 299 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 INTS10Q9NVR2 710 aaKnown RBP8.63□□□□□ -1.03
TDP1-203ENST00000393454 IL36AQ9UHA7 158 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 C5orf42Q9H799 3197 aa8.63□□□□□ -1.03
TDP1-203ENST00000393454 KIF26AQ9ULI4 1882 aaPredicted RBP8.62□□□□□ -1.03
TDP1-203ENST00000393454 NPIPB15A6NHN6 443 aaPredicted RBP8.62□□□□□ -1.03
TDP1-203ENST00000393454 WASH3PC4AMC7 463 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 EDF1O60869 148 aaKnown RBP8.62□□□□□ -1.03
TDP1-203ENST00000393454 SRP72O76094 671 aaKnown RBP8.62□□□□□ -1.03
TDP1-203ENST00000393454 COL6A2P12110 1019 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 CPA3P15088 417 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 XPAP23025 273 aaPredicted RBP8.62□□□□□ -1.03
TDP1-203ENST00000393454 PSMA3P25788 255 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 ALDH3A1P30838 453 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 TTPAP49638 278 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 CDKN2DP55273 166 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 CACNG1Q06432 222 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 TYSND1Q2T9J0 566 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 GAB4Q2WGN9 574 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 POM121L1PQ3SYA9 428 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 AARS2Q5JTZ9 985 aaKnown RBP8.62□□□□□ -1.03
TDP1-203ENST00000393454 NAIF1Q69YI7 327 aaPredicted RBP8.62□□□□□ -1.03
TDP1-203ENST00000393454 FAM45BPQ6NSW5 357 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 CRTC1Q6UUV9 634 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 ZCCHC23Q6ZST2 131 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 TPRG1Q6ZUI0 275 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 OTOAQ7RTW8 1153 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 SPATA21Q7Z572 469 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 C10orf107Q8IVU9 208 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 FAM45AQ8TCE6 357 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 SCG3Q8WXD2 468 aaKnown RBP8.62□□□□□ -1.03
TDP1-203ENST00000393454 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.62□□□□□ -1.03
TDP1-203ENST00000393454 ELSPBP1Q96BH3 223 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 FAM136AQ96C01 138 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 NXNL1Q96CM4 212 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 GRAMD1AQ96CP6 724 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 ECHDC3Q96DC8 303 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 SCRN2Q96FV2 425 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 TCF12Q99081 682 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 BRD9Q9H8M2 597 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 GPAMQ9HCL2 828 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 LMCD1Q9NZU5 365 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 CPSF2Q9P2I0 782 aaKnown RBP8.62□□□□□ -1.03
TDP1-203ENST00000393454 VPS9D1Q9Y2B5 631 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 WASF2Q9Y6W5 498 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 REV3LO60673 3130 aa8.62□□□□□ -1.03
TDP1-203ENST00000393454 A0A1W2PQ67 120 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 H7C0S8 307 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 SNX3O60493 162 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 RHOBTB1O94844 696 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms