RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 NXNL1Q96CM4 212 aa11.44□□□□□ -0.58
SMARCAL1-203ENST00000392128 EID2BQ96D98 161 aa11.44□□□□□ -0.58
SMARCAL1-203ENST00000392128 MRPL38Q96DV4 380 aaKnown RBP11.44□□□□□ -0.58
SMARCAL1-203ENST00000392128 LYSMD1Q96S90 227 aa11.44□□□□□ -0.58
SMARCAL1-203ENST00000392128 GDF15Q99988 308 aa11.44□□□□□ -0.58
SMARCAL1-203ENST00000392128 C20orf27Q9GZN8 174 aa11.44□□□□□ -0.58
SMARCAL1-203ENST00000392128 POPDC3Q9HBV1 291 aa11.44□□□□□ -0.58
SMARCAL1-203ENST00000392128 GPAMQ9HCL2 828 aa11.44□□□□□ -0.58
SMARCAL1-203ENST00000392128 IGSF5Q9NSI5 407 aa11.44□□□□□ -0.58
SMARCAL1-203ENST00000392128 OXSMQ9NWU1 459 aa11.44□□□□□ -0.58
SMARCAL1-203ENST00000392128 ERVW-1Q9UQF0 538 aa11.44□□□□□ -0.58
SMARCAL1-203ENST00000392128 TK2O00142 265 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 DCTN3O75935 186 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 LTA4HP09960 611 aaKnown RBP11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 VIPR2P41587 438 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 SLC1A6P48664 564 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 CCNHP51946 323 aaPredicted RBP11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 RAD51Q06609 339 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 ITGA9Q13797 1035 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 CDKN3Q16667 212 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 FAM83EQ2M2I3 478 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 ACCSLQ4AC99 568 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 RARS2Q5T160 578 aaKnown RBP11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 GPR149Q86SP6 731 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 EGFL6Q8IUX8 553 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 NAT16Q8N8M0 369 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 BPIFB1Q8TDL5 484 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 HEXDCQ8WVB3 486 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 FGF13Q92913 245 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 SCYL1Q96KG9 808 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 UBXN10Q96LJ8 280 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 ZNF641Q96N77 438 aaPredicted RBP11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 MRPL57Q9BQC6 102 aaKnown RBP11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 AARSD1Q9BTE6 412 aaKnown RBP11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 KCNK13Q9HB14 408 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 ZFYVE1Q9HBF4 777 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 BPIFA1Q9NP55 256 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 OBP2AQ9NY56 170 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 GDE1Q9NZC3 331 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 XPR1Q9UBH6 696 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 SLCO3A1Q9UIG8 710 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 PPIL1Q9Y3C6 166 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 A0A1W2PQ67 120 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 WASH3PC4AMC7 463 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 PFDN6O15212 129 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 TRIM13O60858 407 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 DNAJC6O75061 913 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 CISD3P0C7P0 127 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 PRSS56P0CW18 603 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 GLRBP48167 497 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 TTPAP49638 278 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 XIAPP98170 497 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 GEN1Q17RS7 908 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 AARS2Q5JTZ9 985 aaKnown RBP11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 AGAP9Q5VTM2 703 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 DPY19L3Q6ZPD9 716 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 ZSWIM9Q86XI8 627 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 FITM2Q8N6M3 262 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 WFIKKN2Q8TEU8 576 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 MRGPRX3Q96LB0 322 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 MRPL46Q9H2W6 279 aaKnown RBP11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 SUV39H2Q9H5I1 410 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 ZNF395Q9H8N7 513 aaPredicted RBP11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 ACTR5Q9H9F9 607 aaPredicted RBP11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 TRPV4Q9HBA0 871 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 CPSF2Q9P2I0 782 aaKnown RBP11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 DCTN4Q9UJW0 460 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 SLC27A6Q9Y2P4 619 aa11.43□□□□□ -0.58
SMARCAL1-203ENST00000392128 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 TMEM114B3SHH9 223 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 ANKRD65E5RJM6 399 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 TRIM24O15164 1050 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 ITM2AO43736 263 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 NDUFS3O75489 264 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 HNF1BP35680 557 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 DGKGP49619 791 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 ARFIP2P53365 341 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 ABCE1P61221 599 aaKnown RBP11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 TIAL1Q01085 375 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 CSHL1Q14406 222 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 GALNTL6Q49A17 601 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 LIPMQ5VYY2 423 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 TRIM68Q6AZZ1 485 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 PSAPL1Q6NUJ1 521 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 PAF1Q8N7H5 531 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 ASIC4Q96FT7 647 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 SIKE1Q9BRV8 207 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 KCNK4Q9NYG8 393 aa11.42□□□□□ -0.58
SMARCAL1-203ENST00000392128 A0A0G2JND7 137 aa11.41□□□□□ -0.58
SMARCAL1-203ENST00000392128 A0A0U1RQS6 177 aa11.41□□□□□ -0.58
SMARCAL1-203ENST00000392128 C1orf232A0A0U1RR37 186 aa11.41□□□□□ -0.58
SMARCAL1-203ENST00000392128 NFATC1O95644 943 aa11.41□□□□□ -0.58
SMARCAL1-203ENST00000392128 ASLP04424 464 aa11.41□□□□□ -0.58
SMARCAL1-203ENST00000392128 SRPRAP08240 638 aaKnown RBP11.41□□□□□ -0.58
SMARCAL1-203ENST00000392128 CCDC166P0CW27 439 aa11.41□□□□□ -0.58
SMARCAL1-203ENST00000392128 ADARP55265 1226 aaKnown RBP11.41□□□□□ -0.58
SMARCAL1-203ENST00000392128 CACNG1Q06432 222 aa11.41□□□□□ -0.58
SMARCAL1-203ENST00000392128 SETDB1Q15047 1291 aa11.41□□□□□ -0.58
SMARCAL1-203ENST00000392128 ACAP2Q15057 778 aa11.41□□□□□ -0.58
SMARCAL1-203ENST00000392128 SPRED3Q2MJR0 410 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 262.8 ms