RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CPSF7Q8N684 471 aaKnown RBP16.15■□□□□ 0.18
SHANK1-204ENST00000391814 FDXACB1Q9BRP7 624 aaPredicted RBP16.15■□□□□ 0.18
SHANK1-204ENST00000391814 KIF20BQ96Q89 1820 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 C19orf81C9J6K1 198 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 PPIL2Q13356 520 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 TOMM20Q15388 145 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 CHST13Q8NET6 341 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 POMPQ9Y244 141 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 RPL4P36578 427 aaKnown RBP16.15■□□□□ 0.18
SHANK1-204ENST00000391814 PRKG2Q13237 762 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 TUBA3CQ13748 450 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 PITRM1Q5JRX3 1037 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 ADGRD1Q6QNK2 874 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 LENG8Q96PV6 779 aaPredicted RBP16.15■□□□□ 0.18
SHANK1-204ENST00000391814 SETD4Q9NVD3 440 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 C9JVG2 144 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 PPP1R26Q5T8A7 1209 aaPredicted RBP16.15■□□□□ 0.18
SHANK1-204ENST00000391814 RD3Q7Z3Z2 195 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 C11orf16Q9NQ32 467 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 AP3D1O14617 1153 aa16.14■□□□□ 0.18
SHANK1-204ENST00000391814 RPL7AP62424 266 aaKnown RBP16.14■□□□□ 0.18
SHANK1-204ENST00000391814 HMBOX1Q6NT76 420 aa16.14■□□□□ 0.18
SHANK1-204ENST00000391814 PAOXQ6QHF9 649 aa16.14■□□□□ 0.18
SHANK1-204ENST00000391814 RASAL3Q86YV0 1011 aa16.14■□□□□ 0.18
SHANK1-204ENST00000391814 ZNF781Q8N8C0 355 aa16.14■□□□□ 0.18
SHANK1-204ENST00000391814 FAM98AQ8NCA5 519 aaKnown RBP16.14■□□□□ 0.18
SHANK1-204ENST00000391814 ATL1Q8WXF7 558 aa16.14■□□□□ 0.18
SHANK1-204ENST00000391814 EMID1Q96A84 441 aaPredicted RBP16.14■□□□□ 0.18
SHANK1-204ENST00000391814 PPM1MQ96MI6 270 aa16.14■□□□□ 0.18
SHANK1-204ENST00000391814 IRGMA1A4Y4 181 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 SGTAO43765 313 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 CDH15P55291 814 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 EFR3AQ14156 821 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF484Q5JVG2 852 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 CLEC6AQ6EIG7 209 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 ANKRD23Q86SG2 305 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF615Q8N8J6 731 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 CCDC3Q9BQI4 270 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 ALG2Q9H553 416 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 SNCAIPQ9Y6H5 919 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 H3BM21 787 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 I3L521 148 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 PLOD2O00469 737 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 CSH1P0DML2 217 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 CSH2P0DML3 217 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 NR2F1P10589 423 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 GOT1P17174 413 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 AQP1P29972 269 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 SMIM11AP58511 58 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 LSM12Q3MHD2 195 aaKnown RBP16.14■□□□□ 0.17
SHANK1-204ENST00000391814 LRRC38Q5VT99 294 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 PRAMEF18Q5VWM3 479 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 DAW1Q8N136 415 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 MTMR9Q96QG7 549 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 LIN28AQ9H9Z2 209 aaKnown RBP16.14■□□□□ 0.17
SHANK1-204ENST00000391814 EMC3Q9P0I2 261 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 TRAFD1O14545 582 aaPredicted RBP16.14■□□□□ 0.17
SHANK1-204ENST00000391814 CDH13P55290 713 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 ELP6Q0PNE2 266 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 USF2Q15853 346 aaPredicted RBP16.14■□□□□ 0.17
SHANK1-204ENST00000391814 POPDC2Q9HBU9 364 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 ATP13A1Q9HD20 1204 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 SNTG1Q9NSN8 517 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 LGALS13Q9UHV8 139 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 A8MV72 311 aaPredicted RBP16.14■□□□□ 0.17
SHANK1-204ENST00000391814 ULK1O75385 1050 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 NTSR2O95665 410 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 ANXA5P08758 320 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 BUD31P41223 144 aaPredicted RBP16.14■□□□□ 0.17
SHANK1-204ENST00000391814 TXNDC11Q6PKC3 985 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 LGI2Q8N0V4 545 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 ACER1Q8TDN7 264 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 PMM1Q92871 262 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 SPACA7Q96KW9 195 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 LGMNQ99538 433 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 NFKBIZQ9BYH8 718 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 SLC28A2O43868 658 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 TFPTP0C1Z6 253 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 RPL6Q02878 288 aaKnown RBP16.14■□□□□ 0.17
SHANK1-204ENST00000391814 ZYG11AQ6WRX3 759 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 CENPSQ8N2Z9 138 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 DRAXINQ8NBI3 349 aaPredicted RBP16.14■□□□□ 0.17
SHANK1-204ENST00000391814 KAZALD1Q96I82 304 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 SLC22A4Q9H015 551 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 PLK2Q9NYY3 685 aa16.14■□□□□ 0.17
SHANK1-204ENST00000391814 NEXMIFQ5QGS0 1516 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 DNAJB2P25686 324 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 RARRES1P49788 294 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 ACOX1Q15067 660 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 PGM5Q15124 567 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 SYT15Q9BQS2 421 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF304Q9HCX3 659 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 TMED5Q9Y3A6 229 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 GSAPA4D1B5 854 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 LRG1P02750 347 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 PSMA1P25786 263 aaKnown RBP16.13■□□□□ 0.17
SHANK1-204ENST00000391814 MAPK12P53778 367 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 TRIM40Q6P9F5 258 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.13■□□□□ 0.17
SHANK1-204ENST00000391814 TWIST2Q8WVJ9 160 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms