RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 UBE3AQ05086 875 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 DCTN2Q13561 401 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 GTF2H2Q13888 395 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 UBE4AQ14139 1066 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF234Q14588 700 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 POSTNQ15063 836 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 FCN2Q15485 313 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 EFNB3Q15768 340 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 TAF12Q16514 161 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 NFIL3Q16649 462 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 KRT71Q3SY84 523 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 SETMARQ53H47 684 aaPredicted RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 SIRPB2Q5JXA9 342 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 FBXO47Q5MNV8 452 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 WDR45BQ5MNZ6 344 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 ANO1Q5XXA6 986 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 SIGIRRQ6IA17 410 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 FAAP20Q6NZ36 180 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 GTF2H2CQ6P1K8 395 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 TMEM81Q6P7N7 255 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 SLC22A25Q6T423 547 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 C17orf99Q6UX52 265 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF852Q6ZMS4 543 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF704Q6ZNC4 412 aaPredicted RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 NOL8Q76FK4 1167 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 MARK2Q7KZI7 788 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 DSG4Q86SJ6 1040 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 MOGAT3Q86VF5 341 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 EPHX4Q8IUS5 362 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 ANKRD18AQ8IVF6 992 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 WDR63Q8IWG1 891 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 ODF3L1Q8IXM7 274 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 KLHDC8BQ8IXV7 354 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 SPICE1Q8N0Z3 855 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 STPG4Q8N801 248 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 ADAD2Q8NCV1 583 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 SLC24A4Q8NFF2 622 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 BBS10Q8TAM1 723 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 TAS1R2Q8TE23 839 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 RUFY2Q8WXA3 655 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 TM9SF4Q92544 642 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 EYA3Q99504 573 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 SYT17Q9BSW7 474 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 RANBP17Q9H2T7 1088 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 VEZTQ9HBM0 779 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 HINT3Q9NQE9 182 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 KLHL1Q9NR64 748 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 TLR8Q9NR97 1041 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 PPP1R14DQ9NXH3 145 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 C1RLQ9NZP8 487 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 FEM1BQ9UK73 627 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 RALYQ9UKM9 306 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 KCNK7Q9Y2U2 307 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 AAR2Q9Y312 384 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 ADAM18Q9Y3Q7 739 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF711Q9Y462 761 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 PSAT1Q9Y617 370 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 STON1Q9Y6Q2 735 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 ADGRF5Q8IZF2 1346 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 COL2A1P02458 1487 aaPredicted RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 IGLV5-45A0A087WSX0 123 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 CCDC196A0A1B0GTZ2 297 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 CBY3A6NI87 242 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 SMIM1B2RUZ4 78 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 HHLA1C9JL84 531 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 USP17L23D6RBM5 183 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF587BE7ETH6 402 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNHIT1O43257 154 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 SPINT2O43291 252 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 SEC14L5O43304 696 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ARHGEF9O43307 516 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 IGLV1-44P01699 117 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 AMBPP02760 352 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 GALTP07902 379 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 PLA2G4BP0C869 781 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 CFC1BP0CG36 223 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 CFC1P0CG37 223 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 G6PDP11413 515 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 COX7A2P14406 83 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 AGAP20933 346 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 MAOAP21397 527 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF10P21506 573 aaPredicted RBP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 TIMP3P35625 211 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 EIF2S3P41091 472 aaKnown RBP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 PAFAH1B1P43034 410 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 FASLGP48023 281 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 GNAQP50148 359 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 NR0B1P51843 470 aaKnown RBP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 CLDN2P57739 230 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 MAD2L1Q13257 205 aaPredicted RBP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 NAE1Q13564 534 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ACVR2BQ13705 512 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 CAMK1Q14012 370 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 TAF5Q15542 800 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 CCDC96Q2M329 555 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 PAPPA-AS1Q5QFB9 102 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 DCST1Q5T197 706 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 MAP3K21Q5TCX8 1036 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ATG16L1Q676U5 607 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms