RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 TRIM33Q9UPN9 1127 aa5.19□□□□□ -1.58
TRAV16-201ENST00000390444 SLC27A6Q9Y2P4 619 aa5.19□□□□□ -1.58
TRAV16-201ENST00000390444 ACTL7AQ9Y615 435 aa5.19□□□□□ -1.58
TRAV16-201ENST00000390444 PRRC2BQ5JSZ5 2229 aaKnown RBP5.19□□□□□ -1.58
TRAV16-201ENST00000390444 CEP290O15078 2479 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 A0A1W2PQ67 120 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 TMEM120BA0PK00 339 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 FAM47DPA6NHR8 397 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 WASH3PC4AMC7 463 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 K7ERQ8 282 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 TRAFD1O14545 582 aaPredicted RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SLC7A4O43246 635 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 HTRA2O43464 458 aaPredicted RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 LDB2O43679 373 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 TYROBPO43914 113 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 PGLSO95336 258 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 MT-CO1P00395 513 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 PRLP01236 227 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SRPRAP08240 638 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SNRPAP09012 282 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 CISD3P0C7P0 127 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ERVK-10P10266 1014 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 BRAFP15056 766 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 TPH1P17752 444 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 KRT15P19012 456 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ARNTP27540 789 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 MDH1P40925 334 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 EIF2DP41214 584 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 VIPR2P41587 438 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 MAGEA12P43365 314 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ARCN1P48444 511 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 DGKGP49619 791 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ZNF140P52738 457 aaPredicted RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 LIMK2P53671 638 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SNRPD1P62314 119 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ECT2LQ008S8 904 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 PDE1BQ01064 536 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SRSF11Q05519 484 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SLC18A2Q05940 514 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 TRAF2Q12933 501 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 GALNT3Q14435 633 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 EIF4HQ15056 248 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 TAF1AQ15573 450 aaPredicted RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 UGP2Q16851 508 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 TSTD2Q5T7W7 516 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 TEDDM1Q5T9Z0 273 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 GRTP1Q5TC63 336 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 MBLAC2Q68D91 279 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 VITQ6UXI7 678 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 PACS1Q6VY07 963 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 TIFABQ6ZNK6 161 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 KIAA0408Q6ZU52 694 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SH2D5Q6ZV89 423 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 MTSS1LQ765P7 747 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 MFSD6LQ8IWD5 586 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 LMNTD2Q8IXW0 634 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SRRM1Q8IYB3 904 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 UNC5BQ8IZJ1 945 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 CACTIN-AS1Q8N1I8 211 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 CPA6Q8N4T0 437 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SLC25A41Q8N5S1 370 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 KDM1BQ8NB78 822 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 PHC3Q8NDX5 983 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 OR2AP1Q8NGE2 309 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 OR13J1Q8NGT2 312 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 GABPB2Q8TAK5 448 aaPredicted RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 CALML6Q8TD86 181 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 BRSK1Q8TDC3 778 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ACMSDQ8TDX5 336 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 TTC9Q92623 222 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 VOPP1Q96AW1 172 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ELSPBP1Q96BH3 223 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ECHDC3Q96DC8 303 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ASIC4Q96FT7 647 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SGSM3Q96HU1 749 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 APOPT1Q96IL0 206 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 NSMCE3Q96MG7 304 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SRPK1Q96SB4 655 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SMC6Q96SB8 1091 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 RBBP8Q99708 897 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 FAM167BQ9BTA0 163 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 CAPS2Q9BXY5 557 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 CPEB1Q9BZB8 566 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ADAM19Q9H013 955 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 LINC00597Q9H2U6 94 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 TRABDQ9H4I3 376 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 CCDC134Q9H6E4 229 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ZFP14Q9HCL3 533 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 HPS4Q9NQG7 708 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 CHRAC1Q9NRG0 131 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 THG1LQ9NWX6 298 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 TBK1Q9UHD2 729 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 SMG5Q9UPR3 1016 aaKnown RBP5.18□□□□□ -1.58
TRAV16-201ENST00000390444 ERVW-1Q9UQF0 538 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 RAI2Q9Y5P3 530 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 MTCH2Q9Y6C9 303 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 REV3LO60673 3130 aa5.18□□□□□ -1.58
TRAV16-201ENST00000390444 BPTFQ12830 3046 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms