RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 PAFAH1B1P43034 410 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 ID4P47928 161 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 ARRB1P49407 418 aaPredicted RBP19.37■□□□□ 0.69
GTF3A-201ENST00000381140 STC1P52823 247 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 PFN3P60673 137 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 PTSQ03393 145 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 OLIG2Q13516 323 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 SPARCL1Q14515 664 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 AGERQ15109 404 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 CCNG2Q16589 344 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 PRUNE1Q86TP1 453 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 GATAD2AQ86YP4 633 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 DCP2Q8IU60 420 aaKnown RBP19.37■□□□□ 0.69
GTF3A-201ENST00000381140 CCHCR1Q8TD31 782 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 RTKNQ9BST9 563 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 GPR63Q9BZJ6 419 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 AAR2Q9Y312 384 aaKnown RBP19.37■□□□□ 0.69
GTF3A-201ENST00000381140 SPO11Q9Y5K1 396 aa19.37■□□□□ 0.69
GTF3A-201ENST00000381140 LOC285095A0A1B0GVY8 99 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 K7ESM1 405 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 PDE2AO00408 941 aaPredicted RBP19.36■□□□□ 0.69
GTF3A-201ENST00000381140 DFNA5O60443 496 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 METTL18O95568 372 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 ATXN1LP0C7T5 689 aaKnown RBP19.36■□□□□ 0.69
GTF3A-201ENST00000381140 ETS1P14921 441 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 STIP1P31948 543 aaKnown RBP19.36■□□□□ 0.69
GTF3A-201ENST00000381140 ACTN2P35609 894 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 KCNJ1P48048 391 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 MTM1Q13496 603 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 FZD2Q14332 565 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 PARP6Q2NL67 630 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 RAET1GQ6H3X3 334 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 GSTA5Q7RTV2 222 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 PELI3Q8N2H9 469 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 OXR1Q8N573 874 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 CCDC89Q8N998 374 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 SETD7Q8WTS6 366 aaKnown RBP19.36■□□□□ 0.69
GTF3A-201ENST00000381140 AP2M1Q96CW1 435 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 LYSMD1Q96S90 227 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 APOOQ9BUR5 198 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 AP1M1Q9BXS5 423 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 ERVMER34-1Q9H9K5 563 aa19.36■□□□□ 0.69
GTF3A-201ENST00000381140 CNOT1A5YKK6 2376 aaKnown RBP19.35■□□□□ 0.69
GTF3A-201ENST00000381140 PGRMC1O00264 195 aaKnown RBP19.35■□□□□ 0.69
GTF3A-201ENST00000381140 USP12O75317 370 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 ITGAVP06756 1048 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 CD59P13987 128 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 HLA-DPA1P20036 260 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 YPEL5P62699 121 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 PTK2BQ14289 1009 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 SHBQ15464 509 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 SLC1A5Q15758 541 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 CDKN3Q16667 212 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 P3H1Q32P28 736 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 PNCKQ6P2M8 343 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 TECPR1Q7Z6L1 1165 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 CBARPQ8N350 705 aaPredicted RBP19.35■□□□□ 0.69
GTF3A-201ENST00000381140 DEFB124Q8NES8 71 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 MYRIPQ8NFW9 859 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 BLOC1S5Q8TDH9 187 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 SCAMP4Q969E2 229 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 PPP1R2P1Q96PQ5 205 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 ABCG8Q9H221 673 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 ZFYVE1Q9HBF4 777 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 MAGEE1Q9HCI5 957 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 DLL3Q9NYJ7 618 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 PKD2L2Q9NZM6 624 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 PCNX2A6NKB5 2137 aa19.35■□□□□ 0.69
GTF3A-201ENST00000381140 SPTY2D1-AS1A0A0U1RR47 76 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 CTAGE15A4D2H0 777 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 SH3BP5O60239 455 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 EPOP01588 193 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 FGF1P05230 155 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 ZSCAN5DPP0CG00 497 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 ZNF883P0CG24 379 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 CTAGE8P0CG41 777 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 GPR1P46091 355 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 TERF1P54274 439 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 BNIP3Q12983 259 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 PUM1Q14671 1186 aaKnown RBP eCLIP19.34■□□□□ 0.697e-7■■■□□ 15.3
GTF3A-201ENST00000381140 NFATC4Q14934 902 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 KCTD19Q17RG1 926 aaPredicted RBP19.34■□□□□ 0.69
GTF3A-201ENST00000381140 ALS2CLQ60I27 953 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 ESRP1Q6NXG1 681 aaKnown RBP19.34■□□□□ 0.69
GTF3A-201ENST00000381140 ENPP7Q6UWV6 458 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 CTAGE6Q86UF2 777 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 PARGQ86W56 976 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 CTAGE4Q8IX94 777 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 PRELID2Q8N945 189 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 LRRC45Q96CN5 670 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 RTP4Q96DX8 246 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 CAMK1GQ96NX5 476 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 NAP1L3Q99457 506 aaPredicted RBP19.34■□□□□ 0.69
GTF3A-201ENST00000381140 TBL1YQ9BQ87 522 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 RIOK2Q9BVS4 552 aaKnown RBP19.34■□□□□ 0.69
GTF3A-201ENST00000381140 WDR26Q9H7D7 661 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 GPR27Q9NS67 375 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 HOMER3Q9NSC5 361 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 KCTD5Q9NXV2 234 aa19.34■□□□□ 0.69
GTF3A-201ENST00000381140 CACNB4O00305 520 aaPredicted RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms