RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 EPHX4Q8IUS5 362 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 CFAP52Q8N1V2 620 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 CBR4Q8N4T8 237 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 KCNA7Q96RP8 456 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 CATSPERBQ9H7T0 1116 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 TBC1D13Q9NVG8 400 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 EBF1Q9UH73 591 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 KCTD3Q9Y597 815 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 LTA4HP09960 611 aaKnown RBP16.27■□□□□ 0.19
NKX3-1-201ENST00000380871 TMED1Q13445 227 aa16.27■□□□□ 0.19
NKX3-1-201ENST00000380871 MBTPS1Q14703 1052 aa16.27■□□□□ 0.19
NKX3-1-201ENST00000380871 PTPRCAPQ14761 206 aa16.27■□□□□ 0.19
NKX3-1-201ENST00000380871 KIF19Q2TAC6 998 aa16.27■□□□□ 0.19
NKX3-1-201ENST00000380871 POTEHQ6S545 545 aa16.27■□□□□ 0.19
NKX3-1-201ENST00000380871 KLHDC8BQ8IXV7 354 aa16.27■□□□□ 0.19
NKX3-1-201ENST00000380871 OR6P1Q8NGX9 317 aa16.27■□□□□ 0.19
NKX3-1-201ENST00000380871 FAM155AB1AL88 458 aaPredicted RBP16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 DLGAP1O14490 977 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 HAPLN1P10915 354 aaPredicted RBP16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 OXTRP30559 389 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 TBX4P57082 545 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 HECTD2Q5U5R9 776 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 AGAP9Q5VTM2 703 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 KIAA0930Q6ICG6 404 aaPredicted RBP16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 BORAQ6PGQ7 559 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 STON2Q8WXE9 905 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 PTERQ96BW5 349 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 MUC3BQ9H195 1237 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 SMOXQ9NWM0 555 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 A0A1B0GTL3 188 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 SLC12A8A0AV02 714 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 M0QZQ0 153 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 MATN3O15232 486 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 CD86P42081 329 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 ALDH3B2P48448 385 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 APLP1P51693 650 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 DSC2Q02487 901 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 SLC10A7Q0GE19 358 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 MAPRE1Q15691 268 aaKnown RBP16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 ARTNQ5T4W7 220 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 PIK3R6Q5UE93 754 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 LARP4Q71RC2 724 aaKnown RBP eCLIP16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 RNF180Q86T96 592 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 ZNF786Q8N393 782 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 OR13J1Q8NGT2 312 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 IRGQQ8WZA9 623 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 FBXO32Q969P5 355 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 C19orf60Q96EN9 201 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 HMCESQ96FZ2 354 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 NSUN5Q96P11 429 aaKnown RBP16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 SLC25A23Q9BV35 468 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 AKTIPQ9H8T0 292 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 MAP10Q9P2G4 905 aa16.26■□□□□ 0.19
NKX3-1-201ENST00000380871 GEMP55040 296 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 SH3BP2P78314 561 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 GRB7Q14451 532 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 SAMD4BQ5PRF9 694 aaKnown RBP16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 VARS2Q5ST30 1063 aaKnown RBP16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 C8orf82Q6P1X6 216 aaPredicted RBP16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 HAUS8Q9BT25 410 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 DCUN1D5Q9BTE7 237 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 GPR62Q9BZJ7 368 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 SP110Q9HB58 689 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 EML4Q9HC35 981 aaKnown RBP16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 PNPLA3Q9NST1 481 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 PADI4Q9UM07 663 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 ACTL7AQ9Y615 435 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 MT-ND1P03886 318 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 FAM163BP0C2L3 166 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 PAMP19021 973 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 CAPN3P20807 821 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 MAPRE2Q15555 327 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 KLC3Q6P597 504 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 KLHDC9Q8NEP7 349 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 CD99L2Q8TCZ2 262 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 PBXIP1Q96AQ6 731 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 RPRD1AQ96P16 312 aaPredicted RBP16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 SOX17Q9H6I2 414 aaPredicted RBP16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 ANKRD12Q6UB98 2062 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 TANC1Q9C0D5 1861 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 A0A0J9YYE9 177 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 AP3B1O00203 1094 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 PSMD3O43242 534 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 GPX3P22352 226 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 ADARP55265 1226 aaKnown RBP16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 IRF5Q13568 498 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 GEN1Q17RS7 908 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 DUS1LQ6P1R4 473 aaKnown RBP16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 PCSK9Q8NBP7 692 aaKnown RBP16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 OR2T34Q8NGX1 318 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 OR2T3Q8NH03 318 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 SNRNP27Q8WVK2 155 aaKnown RBP16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 PSMG2Q969U7 264 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 UBXN10Q96LJ8 280 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 PKMYT1Q99640 499 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 ANKRD60Q9BZ19 345 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 ENTPD7Q9NQZ7 604 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 CDC14AQ9UNH5 594 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 DNAJC15Q9Y5T4 150 aa16.25■□□□□ 0.19
NKX3-1-201ENST00000380871 CYP11A1P05108 521 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms