RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 PIRTP0C851 137 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 ACADSP16219 412 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 ITGAXP20702 1163 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 RFC2P35250 354 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 CYTH1Q15438 398 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 PABPC1LQ4VXU2 614 aaKnown RBP12.62□□□□□ -0.39
VPS16-202ENST00000380445 RALGPS1Q5JS13 557 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 RAB44Q7Z6P3 723 aaPredicted RBP12.62□□□□□ -0.39
VPS16-202ENST00000380445 SLC39A11Q8N1S5 342 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 TOP1MTQ969P6 601 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 PHF21BQ96EK2 531 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 L3HYPDHQ96EM0 354 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 PPP1R36Q96LQ0 422 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 SERPINI1Q99574 410 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 AARSD1Q9BTE6 412 aaKnown RBP12.62□□□□□ -0.39
VPS16-202ENST00000380445 ALG9Q9H6U8 611 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 PRPF19Q9UMS4 504 aaKnown RBP12.62□□□□□ -0.39
VPS16-202ENST00000380445 PCDHGA4Q9Y5G9 962 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 C2orf78A6NCI8 922 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 H0Y626 953 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 TSPAN3O60637 253 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 SLC4A1P02730 911 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 MBL2P11226 248 aaPredicted RBP12.61□□□□□ -0.39
VPS16-202ENST00000380445 CCL5P13501 91 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 HNRNPLP14866 589 aaKnown RBP eCLIP12.61□□□□□ -0.39
VPS16-202ENST00000380445 LPOP22079 712 aaPredicted RBP12.61□□□□□ -0.39
VPS16-202ENST00000380445 PSMA3P25788 255 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 ZNF140P52738 457 aaPredicted RBP12.61□□□□□ -0.39
VPS16-202ENST00000380445 TBL3Q12788 808 aaKnown RBP12.61□□□□□ -0.39
VPS16-202ENST00000380445 TWF1Q12792 350 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 INO80DQ53TQ3 878 aaPredicted RBP12.61□□□□□ -0.39
VPS16-202ENST00000380445 DNAJC14Q6Y2X3 702 aaPredicted RBP12.61□□□□□ -0.39
VPS16-202ENST00000380445 DNAJB7Q7Z6W7 309 aaPredicted RBP12.61□□□□□ -0.39
VPS16-202ENST00000380445 ITIH5Q86UX2 942 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 FBXW8Q8N3Y1 598 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 DNAJC5GQ8N7S2 189 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 KYQ8NBH2 561 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 RHEBL1Q8TAI7 183 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 NMRK1Q9NWW6 199 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 TAS2R13Q9NYV9 303 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 ACTL7AQ9Y615 435 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 A0A1B0GVG6 124 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 ABHD14A-ACY1A0A1B0GW23 586 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 CD1DP15813 335 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 ZNF37AP17032 561 aaPredicted RBP12.61□□□□□ -0.39
VPS16-202ENST00000380445 LAG3P18627 525 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 SP100P23497 879 aaPredicted RBP12.61□□□□□ -0.39
VPS16-202ENST00000380445 RGRP47804 291 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 SGSHP51688 502 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 SMAD3P84022 425 aaKnown RBP12.61□□□□□ -0.39
VPS16-202ENST00000380445 SULT2A1Q06520 285 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 PTPRCAPQ14761 206 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 CXorf57Q6NSI4 855 aaKnown RBP12.61□□□□□ -0.39
VPS16-202ENST00000380445 ZNF549Q6P9A3 640 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 TMEM207Q6UWW9 146 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 C16orf59Q7L2K0 433 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 CUZD1Q86UP6 607 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 TCEAL8Q8IYN2 117 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 OR4K2Q8NGD2 314 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 USP13Q92995 863 aaPredicted RBP12.61□□□□□ -0.39
VPS16-202ENST00000380445 ZNF333Q96JL9 665 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 EXOC2Q96KP1 924 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 ZNF385DQ9H6B1 395 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 ZBTB26Q9HCK0 441 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 HACD3Q9P035 362 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 RAI2Q9Y5P3 530 aa12.61□□□□□ -0.39
VPS16-202ENST00000380445 NDUFS3O75489 264 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 KCNA5P22460 613 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 EPHB1P54762 984 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 TRIM60Q495X7 471 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 ZNF678Q5SXM1 525 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 C1orf53Q5VUE5 145 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 TRIM68Q6AZZ1 485 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 DDX53Q86TM3 631 aaKnown RBP12.6□□□□□ -0.39
VPS16-202ENST00000380445 HJURPQ8NCD3 748 aaPredicted RBP12.6□□□□□ -0.39
VPS16-202ENST00000380445 ZNF689Q96CS4 500 aaPredicted RBP12.6□□□□□ -0.39
VPS16-202ENST00000380445 CATSPER2Q96P56 530 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 TFB2MQ9H5Q4 396 aaKnown RBP12.6□□□□□ -0.39
VPS16-202ENST00000380445 MEAF6Q9HAF1 191 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 PIDD1Q9HB75 910 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 SPG21Q9NZD8 308 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 BRCA2P51587 3418 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 UBA6A0AVT1 1052 aaPredicted RBP12.6□□□□□ -0.39
VPS16-202ENST00000380445 ANKRD66B4E2M5 251 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 SDHDO14521 159 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 SUPT7LO94864 414 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 PRLP01236 227 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 HERVK_113P63132 956 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 ARF5P84085 180 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 SEMA3AQ14563 771 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 PIM3Q86V86 326 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 SNX32Q86XE0 403 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 RBM12BQ8IXT5 1001 aaKnown RBP12.6□□□□□ -0.39
VPS16-202ENST00000380445 LPCAT1Q8NF37 534 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 ERVK-6Q9BXR3 956 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 TRIM4Q9C037 500 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 EFCAB1Q9HAE3 211 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.6□□□□□ -0.39
VPS16-202ENST00000380445 BLOC1S6Q9UL45 172 aa12.6□□□□□ -0.39
VPS16-202ENST00000380445 SPO11Q9Y5K1 396 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms