RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 FRMD7Q6ZUT3 714 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 RAB44Q7Z6P3 723 aaPredicted RBP23.08■■□□□ 1.29
VPS16-201ENST00000380443 ARL14EPQ8N8R7 260 aaPredicted RBP23.08■■□□□ 1.29
VPS16-201ENST00000380443 MDGA1Q8NFP4 955 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 CEP70Q8NHQ1 597 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 LPGAT1Q92604 370 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 ACDQ96AP0 544 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 NSMCE3Q96MG7 304 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 YME1L1Q96TA2 773 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 C2orf49Q9BVC5 232 aaPredicted RBP23.08■■□□□ 1.29
VPS16-201ENST00000380443 NUF2Q9BZD4 464 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 ZBP1Q9H171 429 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 ZNF385DQ9H6B1 395 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 MAN1C1Q9NR34 630 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 ZBTB14O43829 449 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 PSMG1O95456 288 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 PYGLP06737 847 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 PIRTP0C851 137 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 ZNF37AP17032 561 aaPredicted RBP23.08■■□□□ 1.28
VPS16-201ENST00000380443 SP100P23497 879 aaPredicted RBP23.08■■□□□ 1.28
VPS16-201ENST00000380443 CSNK1DP48730 415 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 CLCN4P51793 760 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 RHOAP61586 193 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 CDH18Q13634 790 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 SEMA3AQ14563 771 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 AGR3Q8TD06 166 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 BADQ92934 168 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 ALG14Q96F25 216 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 EXOC2Q96KP1 924 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 CYP2S1Q96SQ9 504 aa23.08■■□□□ 1.28
VPS16-201ENST00000380443 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.07■■□□□ 1.28
VPS16-201ENST00000380443 BUD23O43709 281 aaKnown RBP23.07■■□□□ 1.28
VPS16-201ENST00000380443 CCNT2O60583 730 aaKnown RBP23.07■■□□□ 1.28
VPS16-201ENST00000380443 CDC25CP30307 473 aa23.07■■□□□ 1.28
VPS16-201ENST00000380443 ACTR3P61158 418 aa23.07■■□□□ 1.28
VPS16-201ENST00000380443 TIAL1Q01085 375 aaKnown RBP eCLIP23.07■■□□□ 1.28
VPS16-201ENST00000380443 BTKQ06187 659 aa23.07■■□□□ 1.28
VPS16-201ENST00000380443 PTPRCAPQ14761 206 aa23.07■■□□□ 1.28
VPS16-201ENST00000380443 MPPE1Q53F39 396 aa23.07■■□□□ 1.28
VPS16-201ENST00000380443 PHTF2Q8N3S3 785 aa23.07■■□□□ 1.28
VPS16-201ENST00000380443 DERL2Q9GZP9 239 aa23.07■■□□□ 1.28
VPS16-201ENST00000380443 ALG9Q9H6U8 611 aa23.07■■□□□ 1.28
VPS16-201ENST00000380443 WDR55Q9H6Y2 383 aaPredicted RBP23.07■■□□□ 1.28
VPS16-201ENST00000380443 NDE1Q9NXR1 346 aa23.07■■□□□ 1.28
VPS16-201ENST00000380443 STX18Q9P2W9 335 aaKnown RBP23.07■■□□□ 1.28
VPS16-201ENST00000380443 PCDHGC4Q9Y5F7 938 aa23.07■■□□□ 1.28
VPS16-201ENST00000380443 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.07■■□□□ 1.28
VPS16-201ENST00000380443 A0A088AWK7 358 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 STX7O15400 261 aaKnown RBP23.06■■□□□ 1.28
VPS16-201ENST00000380443 FZD6O60353 706 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 SNAP91O60641 907 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 LRG1P02750 347 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 PDHA1P08559 390 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 ITGB8P26012 769 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 PIK3R1P27986 724 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 MZF1P28698 734 aaPredicted RBP23.06■■□□□ 1.28
VPS16-201ENST00000380443 EPHA3P29320 983 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 MAGEA10P43363 369 aaPredicted RBP23.06■■□□□ 1.28
VPS16-201ENST00000380443 ADARP55265 1226 aaKnown RBP23.06■■□□□ 1.28
VPS16-201ENST00000380443 TRAF2Q12933 501 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 NKAPQ8N5F7 415 aaKnown RBP23.06■■□□□ 1.28
VPS16-201ENST00000380443 MAGEE1Q9HCI5 957 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 GTSE1Q9NYZ3 720 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 SLC7A8Q9UHI5 535 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 VPS51Q9UID3 782 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 TMCO1Q9UM00 188 aa23.06■■□□□ 1.28
VPS16-201ENST00000380443 LCHNA4D1U4 455 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 RHOBTB1O94844 696 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 SLC4A1P02730 911 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 CSF2RAP15509 400 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 GABRR2P28476 465 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 CCR10P46092 362 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 INHBCP55103 352 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 HERVK_113P63132 956 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 RAD51Q06609 339 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 CCDC6Q16204 474 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 ZNF678Q5SXM1 525 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 TXNDC8Q6A555 127 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 CUZD1Q86UP6 607 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 STK40Q8N2I9 435 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 ELMOD1Q8N336 334 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 TTC30BQ8N4P2 665 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 POU5F2Q8N7G0 328 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 WDR60Q8WVS4 1066 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 AUTS2Q8WXX7 1259 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 GCNAQ96QF7 691 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 SLC22A12Q96S37 553 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 ERVK-6Q9BXR3 956 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 UNKQ9C0B0 810 aaKnown RBP23.05■■□□□ 1.28
VPS16-201ENST00000380443 MEAF6Q9HAF1 191 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 SH3BP1Q9Y3L3 701 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 KIAA1671Q9BY89 1806 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 ANKRD36A6QL64 1941 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 NEMP2A6NFY4 417 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 FKBP6O75344 327 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 FGF18O76093 207 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 SRP72O76094 671 aaKnown RBP23.05■■□□□ 1.28
VPS16-201ENST00000380443 CSKP41240 450 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 FPGSQ05932 587 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 SLC34A1Q06495 639 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms