RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 TCEAL2Q9H3H9 227 aaPredicted RBP17■□□□□ 0.31
RER1-202ENST00000378512 TRIM10Q9UDY6 481 aa17■□□□□ 0.31
RER1-202ENST00000378512 DNPEPQ9ULA0 475 aa17■□□□□ 0.31
RER1-202ENST00000378512 TTLL3Q9Y4R7 772 aa17■□□□□ 0.31
RER1-202ENST00000378512 OR1A2Q9Y585 309 aa17■□□□□ 0.31
RER1-202ENST00000378512 DGKBQ9Y6T7 804 aa17■□□□□ 0.31
RER1-202ENST00000378512 U3KQA8 63 aa17■□□□□ 0.31
RER1-202ENST00000378512 HACD1B0YJ81 288 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 ANKRD66B4E2M5 251 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 K7ESM1 405 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 TNFRSF10CO14798 259 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 TLX3O43711 291 aaPredicted RBP16.99■□□□□ 0.31
RER1-202ENST00000378512 GCATO75600 419 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 PCCBP05166 539 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 CKMT1AP12532 417 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 HTR1BP28222 390 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 ETV3P41162 512 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 BLKP51451 505 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 HK3P52790 923 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 KIF5AQ12840 1032 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 XRCC4Q13426 336 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 LLGL1Q15334 1064 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 ALG11Q2TAA5 492 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 LRRC66Q68CR7 880 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 Q6ZVL8 140 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 WDR92Q96MX6 357 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 QKIQ96PU8 341 aaKnown RBP eCLIP16.99■□□□□ 0.31
RER1-202ENST00000378512 TEX101Q9BY14 249 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 CEP41Q9BYV8 373 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 CLPBQ9H078 707 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 SPASTQ9UBP0 616 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 APOBEC3BQ9UH17 382 aaKnown RBP16.99■□□□□ 0.31
RER1-202ENST00000378512 ADGRG1Q9Y653 693 aa16.99■□□□□ 0.31
RER1-202ENST00000378512 GOLGA6L6A8MZA4 724 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 LMO7DNF2Z398 122 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 MTSS1O43312 755 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 SOD1P00441 154 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 ALPPL2P10696 532 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 TSHRP16473 764 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 CD68P34810 354 aaPredicted RBP16.98■□□□□ 0.31
RER1-202ENST00000378512 STC1P52823 247 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 RWDD2BP57060 319 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 PPARDQ03181 441 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 ARHGEF7Q14155 803 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 NOMO1Q15155 1222 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 QPCTQ16769 361 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 FAM182AQ5T1J6 154 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 KCTD16Q68DU8 428 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 NYAP1Q6ZVC0 841 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 B4GALNT4Q76KP1 1039 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 ZNF765Q7L2R6 523 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 CCDC50Q8IVM0 306 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 SDR16C5Q8N3Y7 309 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.98■□□□□ 0.31
RER1-202ENST00000378512 RNF10Q8N5U6 811 aaKnown RBP16.98■□□□□ 0.31
RER1-202ENST00000378512 ATL2Q8NHH9 583 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 APOLD1Q96LR9 279 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 AGAP3Q96P47 875 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 RBM15Q96T37 977 aaKnown RBP eCLIP16.98■□□□□ 0.313e-7■■□□□ 13.6
RER1-202ENST00000378512 VAT1Q99536 393 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 BOCQ9BWV1 1114 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 LGR4Q9BXB1 951 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 OSBPL8Q9BZF1 889 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 USP29Q9HBJ7 922 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 GLOD4Q9HC38 313 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 ASXL3Q9C0F0 2248 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 BPTFQ12830 3046 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 KNTC1P50748 2209 aa16.98■□□□□ 0.31
RER1-202ENST00000378512 URB1O60287 2271 aaKnown RBP16.97■□□□□ 0.31
RER1-202ENST00000378512 A0A0U1RQS6 177 aa16.97■□□□□ 0.31
RER1-202ENST00000378512 TMEM202A6NGA9 273 aa16.97■□□□□ 0.31
RER1-202ENST00000378512 PYGMP11217 842 aa16.97■□□□□ 0.31
RER1-202ENST00000378512 ITPKBP27987 946 aa16.97■□□□□ 0.31
RER1-202ENST00000378512 NAP1L1P55209 391 aaKnown RBP16.97■□□□□ 0.31
RER1-202ENST00000378512 SRP54P61011 504 aaKnown RBP16.97■□□□□ 0.31
RER1-202ENST00000378512 PRRT3Q5FWE3 981 aa16.97■□□□□ 0.31
RER1-202ENST00000378512 ZCCHC8Q6NZY4 707 aaKnown RBP16.97■□□□□ 0.31
RER1-202ENST00000378512 ENPP7Q6UWV6 458 aa16.97■□□□□ 0.31
RER1-202ENST00000378512 SYCE1Q8N0S2 351 aa16.97■□□□□ 0.31
RER1-202ENST00000378512 TSACCQ96A04 125 aaPredicted RBP16.97■□□□□ 0.31
RER1-202ENST00000378512 NXPE2Q96DL1 559 aa16.97■□□□□ 0.31
RER1-202ENST00000378512 BBC3Q96PG8 261 aaPredicted RBP16.97■□□□□ 0.31
RER1-202ENST00000378512 HEMGNQ9BXL5 484 aa16.97■□□□□ 0.31
RER1-202ENST00000378512 SLC13A1Q9BZW2 595 aa16.97■□□□□ 0.31
RER1-202ENST00000378512 WDR26Q9H7D7 661 aa16.97■□□□□ 0.31
RER1-202ENST00000378512 ZFC3H1O60293 1989 aaKnown RBP16.97■□□□□ 0.31
RER1-202ENST00000378512 ARHGEF17Q96PE2 2063 aaPredicted RBP16.97■□□□□ 0.31
RER1-202ENST00000378512 A0A087WV48 116 aa16.96■□□□□ 0.31
RER1-202ENST00000378512 MACROD2A1Z1Q3 448 aa16.96■□□□□ 0.31
RER1-202ENST00000378512 MIF4GDA9UHW6 222 aaKnown RBP16.96■□□□□ 0.31
RER1-202ENST00000378512 CACNB4O00305 520 aaPredicted RBP16.96■□□□□ 0.31
RER1-202ENST00000378512 DDX3YO15523 660 aaKnown RBP16.96■□□□□ 0.31
RER1-202ENST00000378512 ARHGAP6O43182 974 aa16.96■□□□□ 0.31
RER1-202ENST00000378512 RASGRP1O95267 797 aa16.96■□□□□ 0.31
RER1-202ENST00000378512 MYCLP1P12525 358 aaPredicted RBP16.96■□□□□ 0.31
RER1-202ENST00000378512 KELP23276 732 aa16.96■□□□□ 0.31
RER1-202ENST00000378512 EPHB1P54762 984 aa16.96■□□□□ 0.31
RER1-202ENST00000378512 DAB2P98082 770 aa16.96■□□□□ 0.31
RER1-202ENST00000378512 SOWAHCQ53LP3 525 aaPredicted RBP16.96■□□□□ 0.31
RER1-202ENST00000378512 LVRNQ6Q4G3 990 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms