RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 IRGCQ6NXR0 463 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 ADCK1Q86TW2 530 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 FAM156AQ8NDB6 213 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 PLEKHA8Q96JA3 519 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 MYOCQ99972 504 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 CADM1Q9BY67 442 aaKnown RBP13.19□□□□□ -0.3
NPHP4-203ENST00000378169 VRTNQ9H8Y1 702 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 EIF2B3Q9NR50 452 aaKnown RBP13.19□□□□□ -0.3
NPHP4-203ENST00000378169 SLC2A6Q9UGQ3 507 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 SRRDQ9UH36 339 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 ARL5AQ9Y689 179 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 NWD2Q9ULI1 1742 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 SLC38A8A6NNN8 435 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 PTGES3LE9PB15 166 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 ACRP10323 421 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 COL6A2P12110 1019 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 MAPK10P53779 464 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 CNTN1Q12860 1018 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 LSM12Q3MHD2 195 aaKnown RBP13.19□□□□□ -0.3
NPHP4-203ENST00000378169 ZC3H12BQ5HYM0 836 aaKnown RBP13.19□□□□□ -0.3
NPHP4-203ENST00000378169 LRRC73Q5JTD7 316 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 RAET1GQ6H3X3 334 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 KIAA0408Q6ZU52 694 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 FBXW8Q8N3Y1 598 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 GPR156Q8NFN8 814 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 STYXQ8WUJ0 223 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 SEC14L1Q92503 715 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 MAGEH1Q9H213 219 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 MTF2Q9Y483 593 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-203ENST00000378169 UBXN8O00124 270 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 INSIG1O15503 277 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 NRP2O60462 931 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 NELFEP18615 380 aaKnown RBP13.19□□□□□ -0.3
NPHP4-203ENST00000378169 ACVRL1P37023 503 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 TSNQ15631 228 aaKnown RBP13.19□□□□□ -0.3
NPHP4-203ENST00000378169 ZIK1Q3SY52 487 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-203ENST00000378169 C10orf82Q8WW14 230 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 RMND5BQ96G75 393 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-203ENST00000378169 FCRL5Q96RD9 977 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 TRMOQ9BU70 441 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 FETUBQ9UGM5 382 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 A0A0J9YYE9 177 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 MYADML2A6NDP7 307 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 ITM2AO43736 263 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 KIF1CO43896 1103 aaKnown RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 HS6ST1O60243 411 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 PRAMEF1O95521 474 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 COX7A2P14406 83 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 GJA1P17302 382 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 NDST2P52849 883 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 TIAM2Q8IVF5 1701 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 CPNE9Q8IYJ1 553 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 SLAIN1Q8ND83 568 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 PTCD2Q8WV60 388 aaKnown RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 OSCP1Q8WVF1 389 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 ANKRD27Q96NW4 1050 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 ADAMTS10Q9H324 1103 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 THG1LQ9NWX6 298 aaKnown RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 HS3ST4Q9Y661 456 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 TRIM38O00635 465 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 TM7SF2O76062 418 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 IL10RBQ08334 325 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 ILF2Q12905 390 aaKnown RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 NEDD8Q15843 81 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 ARHGAP36Q6ZRI8 547 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 CAND1Q86VP6 1230 aaKnown RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 ZDHHC13Q8IUH4 622 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 UTP15Q8TED0 518 aaKnown RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 TRIB2Q92519 343 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 TSSK3Q96PN8 268 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 DCUN1D5Q9BTE7 237 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 KIAA1522Q9P206 1035 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 DNAJB4Q9UDY4 337 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 Q9Y3F1 56 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 AK5Q9Y6K8 562 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 COL2A1P02458 1487 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 C15orf38-AP3S2A0A0A6YYH1 394 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 CNMDO75829 334 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 CNTN5O94779 1100 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 OTCP00480 354 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 PAX7P23759 505 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 GPR1P46091 355 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 GATMP50440 423 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 CLDN10P78369 228 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 ZYG11AQ6WRX3 759 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 ARPINQ7Z6K5 226 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 TP53INP2Q8IXH6 220 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 DSELQ8IZU8 1212 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 DHRSXQ8N5I4 330 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 C19orf60Q96EN9 201 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 USP29Q9HBJ7 922 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 DDX18Q9NVP1 670 aaKnown RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 MIOSQ9NXC5 875 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 LEF1Q9UJU2 399 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 ANAPC2Q9UJX6 822 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 ZMYND8Q9ULU4 1186 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 TOGARAM1Q9Y4F4 1720 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 DNAJC25-GNG10A0A024R161 153 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms