RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 HEXDCQ8WVB3 486 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 REPS1Q96D71 796 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 TPD52L3Q96J77 140 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 SIGLEC10Q96LC7 697 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 TUBA1CQ9BQE3 449 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 ANKHQ9HCJ1 492 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 ZNF541Q9H0D2 1346 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 COL2A1P02458 1487 aaPredicted RBP8.77□□□□□ -1.01
PCDH9-202ENST00000377865 SLC22A1O15245 554 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 RGS10O43665 173 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 LGR5O75473 907 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 CNPP09543 421 aaKnown RBP8.77□□□□□ -1.01
PCDH9-202ENST00000377865 ITGA2P17301 1181 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 ARF4P18085 180 aaPredicted RBP8.77□□□□□ -1.01
PCDH9-202ENST00000377865 LCP2Q13094 533 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 C11orf91Q3C1V1 193 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 VPS26BQ4G0F5 336 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 NANOGNBQ7Z5D8 188 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 PHTF2Q8N3S3 785 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 SH3KBP1Q96B97 665 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 MFSD3Q96ES6 412 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 Q96MT0 163 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 EMILIN2Q9BXX0 1053 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 ADGRE2Q9UHX3 823 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 ZMYM5Q9UJ78 669 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 WBP11Q9Y2W2 641 aaKnown RBP8.77□□□□□ -1.01
PCDH9-202ENST00000377865 MYL12BO14950 172 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 HALP42357 657 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 DNAJB13P59910 316 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 RHOAP61586 193 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 CSNK2BP67870 215 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 PLCL1Q15111 1095 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 STEAP4Q687X5 459 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 FAM35AQ86V20 835 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 TMEM165Q9HC07 324 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 NMRK2Q9NPI5 230 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 CLN6Q9NWW5 311 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 SPASTQ9UBP0 616 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 PCDHB5Q9Y5E4 795 aa8.77□□□□□ -1.01
PCDH9-202ENST00000377865 ATP6AP2A0A1C7CYW4 349 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 RBM47A0AV96 593 aaKnown RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 ZNF99A8MXY4 864 aaPredicted RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 ATP6AP2O75787 350 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 ARIH2O95376 493 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 GUCA1CO95843 209 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 RAP2AP10114 183 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 IRF1P10914 325 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 MZF1P28698 734 aaPredicted RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 OR1G1P47890 313 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 HCAR3P49019 387 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 SCNN1BP51168 640 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 ECT2LQ008S8 904 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 MFSD10Q14728 455 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 DNAJB8Q8NHS0 232 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 NRG4Q8WWG1 115 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 NTAN1Q96AB6 310 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 CAMKK2Q96RR4 588 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 FZD8Q9H461 694 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 GMIPQ9P107 970 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 CCDC162PA2VCL2 907 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 CCDC182A6NF36 153 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 NDUFS2O75306 463 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 TSPAN8P19075 237 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 UBE3AQ05086 875 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 HNRNPDQ14103 355 aaKnown RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 UBAP2Q5T6F2 1119 aaKnown RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 ERICH5Q6P6B1 374 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 PLEKHH3Q7Z736 793 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 SCAIQ8N9R8 606 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 REXO5Q96IC2 774 aaKnown RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 NODALQ96S42 347 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 HNRNPABQ99729 332 aaKnown RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 COQ7Q99807 217 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 MRM3Q9HC36 420 aaKnown RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 CDV3Q9UKY7 258 aaKnown RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 DYRK1BQ9Y463 629 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 PLK4O00444 970 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 EFCAB14O75071 495 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 PPIBP23284 216 aaKnown RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 TALDO1P37837 337 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 RPL38P63173 70 aaKnown RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 SH3D19Q5HYK7 790 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 CAND1Q86VP6 1230 aaKnown RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 P2RY8Q86VZ1 359 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 MIB1Q86YT6 1006 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 OR52K2Q8NGK3 314 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 FCGR1BQ92637 280 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 HDAC10Q969S8 669 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 P2RX7Q99572 595 aaKnown RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 GPR22Q99680 433 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 COLEC11Q9BWP8 271 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 EHD1Q9H4M9 534 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 NUDT4Q9NZJ9 180 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 FAM50BQ9Y247 325 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 POLR3HQ9Y535 204 aaPredicted RBP8.76□□□□□ -1.01
PCDH9-202ENST00000377865 NRCAMQ92823 1304 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 CASTOR2A6NHX0 329 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 MATN3O15232 486 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 IMPDH1P20839 514 aa8.76□□□□□ -1.01
PCDH9-202ENST00000377865 WARSP23381 471 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms