RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	ARF5	P84085	180 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	MPP1	Q00013	466 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	DCTN2	Q13561	401 aa	Known RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	PPM1J	Q5JR12	505 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	GRTP1	Q5TC63	336 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	NEPRO	Q6NW34	567 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	GLT6D1	Q7Z4J2	308 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	TMEM135	Q86UB9	458 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	ANKK1	Q8NFD2	765 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	APOPT1	Q96IL0	206 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	ELMO2	Q96JJ3	720 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	ADGRE3	Q9BY15	652 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	LRRC3	Q9BY71	257 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	BPIFA1	Q9NP55	256 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	CDH22	Q9UJ99	828 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	ARHGAP26	Q9UNA1	814 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	CHD7	Q9P2D1	2997 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	ZCWPW2	A0A1B0GU75	182 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	UBA6	A0AVT1	1052 aa	Predicted RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	OR51F1	A6NGY5	319 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	MAP3K7	O43318	606 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	RECQL	P46063	649 aa	Predicted RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	PCYT1A	P49585	367 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	STK19	P49842	368 aa	Predicted RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	WDR4	P57081	412 aa	Known RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	CCDC153	Q494R4	210 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	TNFAIP8L3	Q5GJ75	292 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	STEAP4	Q687X5	459 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	PATL1	Q86TB9	770 aa	Known RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	FITM2	Q8N6M3	262 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	FAM13C	Q8NE31	585 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	SPOCK2	Q92563	424 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	SMIM14	Q96QK8	99 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	TMCC2	O75069	709 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	HLA-DPA1	P20036	260 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	S100A1	P23297	94 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	GMPR	P36959	345 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	PGGT1B	P53609	377 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	WDR45B	Q5MNZ6	344 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	TEDDM1	Q5T9Z0	273 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	DENND5A	Q6IQ26	1287 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	MARK2	Q7KZI7	788 aa	Known RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	MYLIP	Q8WY64	445 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	ZFYVE19	Q96K21	471 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	TBATA	Q96M53	351 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	SAMD11	Q96NU1	681 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	GPR63	Q9BZJ6	419 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	ARHGEF3	Q9NR81	526 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	SLC25A13	Q9UJS0	675 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	MTO1	Q9Y2Z2	717 aa	Known RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	LTBP2	Q14767	1821 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	PHGDH	O43175	533 aa	Known RBP	11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	NDST3	O95803	873 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	LATS1	O95835	1130 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	FGF1	P05230	155 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	TYR	P14679	529 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	CNTF	P26441	200 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	NNMT	P40261	264 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	DLG2	Q15700	870 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	UGP2	Q16851	508 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	CAMK1D	Q8IU85	385 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	TEX26	Q8N6G2	289 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	KIFC1	Q9BW19	673 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	USP15	Q9Y4E8	981 aa	Predicted RBP	11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	GPC6	Q9Y625	555 aa	Predicted RBP	11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	PLXNA3	P51805	1871 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499		A0A0U1RQS6	177 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	C2orf81	A6NN90	581 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	SMAD6	O43541	496 aa	Known RBP	11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	OLFM2	O95897	454 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	DDX6	P26196	483 aa	Known RBP eCLIP	11.68	□□□□□ -0.54	2e-6	■■■■□ 20
LMO7-204	ENST00000377499	ADRA1A	P35348	466 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	CCNG1	P51959	295 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	SEMG2	Q02383	582 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	SULT2A1	Q06520	285 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	BCL2L1	Q07817	233 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	ITIH4	Q14624	930 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	RFTN1	Q14699	578 aa	Predicted RBP	11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	C16orf72	Q14CZ0	275 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	CRY1	Q16526	586 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	TSTD2	Q5T7W7	516 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	FSTL4	Q6MZW2	842 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	VASH1	Q7L8A9	365 aa	Predicted RBP	11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	NUDCD3	Q8IVD9	361 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	BANP	Q8N9N5	519 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	OR13C4	Q8NGS5	318 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	CKAP2	Q8WWK9	683 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	CENPT	Q96BT3	561 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	VPS39	Q96JC1	886 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	NSMCE3	Q96MG7	304 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	DHRS4	Q9BTZ2	278 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	IRF2BPL	Q9H1B7	796 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	DUS2	Q9NX74	493 aa	Known RBP	11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	CRYL1	Q9Y2S2	319 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms