RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 MAXP61244 160 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 SLC25A11Q02978 314 aaKnown RBP19.17■□□□□ 0.66
CBWD3-204ENST00000377349 HADHQ16836 314 aaKnown RBP19.17■□□□□ 0.66
CBWD3-204ENST00000377349 SPECC1LQ69YQ0 1117 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 TAF8Q7Z7C8 310 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 JAMLQ86YT9 394 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 BBS5Q8N3I7 341 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 COQ10AQ96MF6 247 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 PSKH2Q96QS6 385 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 TTLL3Q9Y4R7 772 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 B4DGG1 531 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 CBFA2T2O43439 604 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 MAP3K6O95382 1288 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 PEX11BO96011 259 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 FUCA1P04066 466 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 TPM1P09493 284 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 AP1S1P61966 158 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 B4GALNT1Q00973 533 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 ITKQ08881 620 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 ACOX1Q15067 660 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 SKOR2Q2VWA4 1001 aaPredicted RBP19.17■□□□□ 0.66
CBWD3-204ENST00000377349 PNCKQ6P2M8 343 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 C17orf82Q86X59 251 aaPredicted RBP19.17■□□□□ 0.66
CBWD3-204ENST00000377349 NRROSQ86YC3 692 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 CPNE8Q86YQ8 564 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 TEKT4Q8WW24 435 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 CTNNBL1Q8WYA6 563 aaPredicted RBP19.17■□□□□ 0.66
CBWD3-204ENST00000377349 PACSIN1Q9BY11 444 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 SUDS3Q9H7L9 328 aaPredicted RBP19.17■□□□□ 0.66
CBWD3-204ENST00000377349 CYP4F12Q9HCS2 524 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 FOXJ2Q9P0K8 574 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 LRIT1Q9P2V4 623 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 B4GALT6Q9UBX8 382 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 PRAMEF33A0A0G2JMD5 474 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 PRSS38A1L453 326 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 GOLGA6CA6NDK9 693 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 GOLGA6BA6NDN3 693 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 HTRA2O43464 458 aaPredicted RBP19.16■□□□□ 0.66
CBWD3-204ENST00000377349 NUDT21O43809 227 aaKnown RBP19.16■□□□□ 0.66
CBWD3-204ENST00000377349 PRAMEF10O60809 474 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 CD48P09326 243 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 GOLGA6DP0CG33 693 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 LIPCP11150 499 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 CR2P20023 1033 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 POLR2LP62875 67 aaKnown RBP19.16■□□□□ 0.66
CBWD3-204ENST00000377349 TSR1Q2NL82 804 aaKnown RBP19.16■□□□□ 0.66
CBWD3-204ENST00000377349 CBARPQ8N350 705 aaPredicted RBP19.16■□□□□ 0.66
CBWD3-204ENST00000377349 NIPA2Q8N8Q9 360 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 KCTD6Q8NC69 237 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 PTCD2Q8WV60 388 aaKnown RBP19.16■□□□□ 0.66
CBWD3-204ENST00000377349 ZNF599Q96NL3 588 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 TSPY26PQ9H489 355 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 WDR26Q9H7D7 661 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 SPATS2LQ9NUQ6 558 aaKnown RBP19.16■□□□□ 0.66
CBWD3-204ENST00000377349 ZNHIT6Q9NWK9 470 aaKnown RBP19.16■□□□□ 0.66
CBWD3-204ENST00000377349 GOLGA6AQ9NYA3 693 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 MOSPD1Q9UJG1 213 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 PCDHGC4Q9Y5F7 938 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 ST14Q9Y5Y6 855 aa19.16■□□□□ 0.66
CBWD3-204ENST00000377349 FLNCQ14315 2725 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 DOPEY2Q9Y3R5 2298 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 C9orf172C9J069 976 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 AGRPO00253 132 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 AKR1B10O60218 316 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 CPP00450 1065 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 JMJD7P0C870 316 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 WT1P19544 449 aaPredicted RBP19.15■□□□□ 0.66
CBWD3-204ENST00000377349 KELP23276 732 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 MMP13P45452 471 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 CNGA3Q16281 694 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 ZNF438Q7Z4V0 828 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 DTX1Q86Y01 620 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 PGBD5Q8N414 524 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 GPBAR1Q8TDU6 330 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 SGF29Q96ES7 293 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 SEMA6CQ9H3T2 930 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 DPEP2Q9H4A9 486 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 NT5MQ9NPB1 228 aa19.15■□□□□ 0.66
CBWD3-204ENST00000377349 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.14■□□□□ 0.65
CBWD3-204ENST00000377349 B4GAT1O43505 415 aa19.14■□□□□ 0.65
CBWD3-204ENST00000377349 MFSD11O43934 449 aa19.14■□□□□ 0.65
CBWD3-204ENST00000377349 CEACAM5P06731 702 aa19.14■□□□□ 0.65
CBWD3-204ENST00000377349 MYCLP1P12525 358 aaPredicted RBP19.14■□□□□ 0.65
CBWD3-204ENST00000377349 MAZP56270 477 aaKnown RBP19.14■□□□□ 0.65
CBWD3-204ENST00000377349 NR1D2Q14995 579 aa19.14■□□□□ 0.65
CBWD3-204ENST00000377349 C16orf72Q14CZ0 275 aa19.14■□□□□ 0.65
CBWD3-204ENST00000377349 ATP13A4Q4VNC1 1196 aa19.14■□□□□ 0.65
CBWD3-204ENST00000377349 MARC1Q5VT66 337 aa19.14■□□□□ 0.65
CBWD3-204ENST00000377349 ZFAND4Q86XD8 727 aa19.14■□□□□ 0.65
CBWD3-204ENST00000377349 TMEM159Q96B96 161 aa19.14■□□□□ 0.65
CBWD3-204ENST00000377349 TEX101Q9BY14 249 aa19.14■□□□□ 0.65
CBWD3-204ENST00000377349 NOD2Q9HC29 1040 aa19.14■□□□□ 0.65
CBWD3-204ENST00000377349 MAFKO60675 156 aa19.13■□□□□ 0.65
CBWD3-204ENST00000377349 FGF1P05230 155 aa19.13■□□□□ 0.65
CBWD3-204ENST00000377349 H2AFZP0C0S5 128 aa19.13■□□□□ 0.65
CBWD3-204ENST00000377349 CCNB1P14635 433 aa19.13■□□□□ 0.65
CBWD3-204ENST00000377349 LHCGRP22888 699 aa19.13■□□□□ 0.65
CBWD3-204ENST00000377349 HSPA9P38646 679 aaKnown RBP19.13■□□□□ 0.65
CBWD3-204ENST00000377349 TRIM14Q14142 442 aa19.13■□□□□ 0.65
CBWD3-204ENST00000377349 PTPRRQ15256 657 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms