RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 NRSN1Q8IZ57 195 aa8.47□□□□□ -1.05
CRNKL1-202ENST00000377340 CLDN19Q8N6F1 224 aa8.47□□□□□ -1.05
CRNKL1-202ENST00000377340 DCAF4L2Q8NA75 395 aa8.47□□□□□ -1.05
CRNKL1-202ENST00000377340 STAG3L4Q8TBR4 150 aa8.47□□□□□ -1.05
CRNKL1-202ENST00000377340 MRPL38Q96DV4 380 aaKnown RBP8.47□□□□□ -1.05
CRNKL1-202ENST00000377340 ECT2Q9H8V3 914 aa8.47□□□□□ -1.05
CRNKL1-202ENST00000377340 PARVBQ9HBI1 364 aa8.47□□□□□ -1.05
CRNKL1-202ENST00000377340 TMEM59LQ9UK28 342 aa8.47□□□□□ -1.05
CRNKL1-202ENST00000377340 CFAP20Q9Y6A4 193 aaKnown RBP8.47□□□□□ -1.05
CRNKL1-202ENST00000377340 V9GYQ6 96 aa8.47□□□□□ -1.05
CRNKL1-202ENST00000377340 A0A1B0GUL6 1792 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 TTC34A8MYJ7 566 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 RPP40O75818 363 aaKnown RBP8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 ABCB1P08183 1280 aaPredicted RBP8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 PKMP14618 531 aaKnown RBP8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 CNTFP26441 200 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 RPL10P27635 214 aaKnown RBP8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 NMBRP28336 390 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 GNPDA1P46926 289 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 FAM189BP81408 668 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 MPP1Q00013 466 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 RPL6Q02878 288 aaKnown RBP8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 WASHC5Q12768 1159 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 PTPRCAPQ14761 206 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 TSNAXIP1Q2TAA8 658 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 PGS1Q32NB8 556 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 EMC10Q5UCC4 262 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 TP53INP2Q8IXH6 220 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 APCDD1Q8J025 514 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 PCDH20Q8N6Y1 951 aaKnown RBP8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 SHKBP1Q8TBC3 707 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 SERPINI1Q99574 410 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 ZNF334Q9HCZ1 680 aaPredicted RBP8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 COQ6Q9Y2Z9 468 aa8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 DDX60LQ5H9U9 1706 aaKnown RBP8.46□□□□□ -1.05
CRNKL1-202ENST00000377340 RHPN2P1A8MT19 583 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 E9PBE3 544 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 PLK4O00444 970 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 KLHL41O60662 606 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 TRIM13O60858 407 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 CYP7B1O75881 506 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 FAM155BO75949 473 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 USP1O94782 785 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 CPSF4O95639 269 aaKnown RBP8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 SHBGP04278 402 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 MYBL2P10244 700 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 ATF6P18850 670 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 ITPKAP23677 461 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 CD70P32970 193 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 ADAM17P78536 824 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 SEMA5AQ13591 1074 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 CYP2A13Q16696 494 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 DUPD1Q68J44 220 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 LRRC8EQ6NSJ5 796 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 DENND6AQ8IWF6 608 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 BEND7Q8N7W2 519 aaPredicted RBP8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 PTGR2Q8N8N7 351 aaPredicted RBP8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 GIMAP7Q8NHV1 300 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 LINC01599Q8WXQ3 324 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 AZIN2Q96A70 460 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 GPR21Q99679 349 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 THUMPD3Q9BV44 507 aaKnown RBP8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 LMAN2LQ9H0V9 348 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 WDR26Q9H7D7 661 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 TMEM189-UBE2V1I3L0A0 370 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 CCDC22O60826 627 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 SEC22BO75396 215 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 ITGA2BP08514 1039 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 RPA3P35244 121 aaPredicted RBP8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 CYP4F2P78329 520 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 IRAK1BP1Q5VVH5 260 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 DNAJC14Q6Y2X3 702 aaPredicted RBP8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 SPATA24Q86W54 205 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 SIX5Q8N196 739 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 MIER2Q8N344 545 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 NKAPQ8N5F7 415 aaKnown RBP8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 GSTCDQ8NEC7 633 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 TRPC4APQ8TEL6 797 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 SCAMP4Q969E2 229 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 SLC38A3Q99624 504 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 VCX3BQ9H321 246 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 TXLNGQ9NUQ3 528 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 NCDNQ9UBB6 729 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 CDH22Q9UJ99 828 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 PHTF1Q9UMS5 762 aa8.46□□□□□ -1.06
CRNKL1-202ENST00000377340 A0A1W2PQ67 120 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 AKAP10O43572 662 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 ALAS2P22557 587 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 GRIA2P42262 883 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 CLDN10P78369 228 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 CREB5Q02930 508 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 DMTNQ08495 405 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 FUT11Q495W5 492 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 AGBL2Q5U5Z8 902 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 CACHD1Q5VU97 1274 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 TANGO2Q6ICL3 276 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 MSANTD2Q6P1R3 559 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 PRSS58Q8IYP2 241 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 STYXQ8WUJ0 223 aa8.45□□□□□ -1.06
CRNKL1-202ENST00000377340 OVCA2Q8WZ82 227 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms