RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 ARHGEF37A1IGU5 675 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 RHOBTB1O94844 696 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 STAMBPO95630 424 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 HSPA1AP0DMV8 641 aaKnown RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 HSPA1BP0DMV9 641 aaKnown RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 ELNP15502 786 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 CD1DP15813 335 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 FLT3LGP49771 235 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 APLP1P51693 650 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 NDST2P52849 883 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 HERVK_113P63132 956 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 SATB1Q01826 763 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 RFTN1Q14699 578 aaPredicted RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 SOCS4Q8WXH5 440 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 SLCO4A1Q96BD0 722 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 PPP1R2P1Q96PQ5 205 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 TMEM79Q9BSE2 394 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 ERVK-6Q9BXR3 956 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 POLR1EQ9GZS1 481 aaKnown RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 ARNT2Q9HBZ2 717 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 PRDM5Q9NQX1 630 aaPredicted RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 TMEM248Q9NWD8 314 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 PDLIM1O00151 329 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 GPR39O43194 453 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 SEC24DO94855 1032 aaPredicted RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 TNFAIP8O95379 198 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 MT-ND1P03886 318 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 HGFP14210 728 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 CCND3P30281 292 aaPredicted RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 FKBP1BP68106 108 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 ARMC3Q5W041 872 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 KRT80Q6KB66 452 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 MSANTD2Q6P1R3 559 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 LARP4Q71RC2 724 aaKnown RBP eCLIP16.23■□□□□ 0.193e-8■□□□□ 9.9
TRIM27-202ENST00000377199 DHFR2Q86XF0 187 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 DCP1BQ8IZD4 617 aaKnown RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 LGI2Q8N0V4 545 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 CATSPER1Q8NEC5 780 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 VPS33AQ96AX1 596 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 ZNF512Q96ME7 567 aaPredicted RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 VCX3AQ9NNX9 186 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 POLR3BQ9NW08 1133 aaPredicted RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 PCDHB8Q9UN66 801 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 SCML2Q9UQR0 700 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 MROH6A6NGR9 719 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 BAIAP3O94812 1187 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 EEF1DP29692 281 aaKnown RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 RPL5P46777 297 aaKnown RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 DIO3P55073 304 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 BIRC2Q13490 618 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 CLLU1OSQ5K130 101 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 FAM45BPQ6NSW5 357 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 MRNIPQ6NTE8 343 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 PAQR3Q6TCH7 311 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 EFHBQ8N7U6 833 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 DNAJB14Q8TBM8 379 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 FAM45AQ8TCE6 357 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 BTN2A3PQ96KV6 586 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 C1orf50Q9BV19 199 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 CRISPLD1Q9H336 500 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 CATSPERZQ9NTU4 200 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 SUCOQ9UBS9 1254 aaKnown RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 RNF112Q9ULX5 631 aa16.23■□□□□ 0.19
TRIM27-202ENST00000377199 TDRD15B5MCY1 1934 aaKnown RBP16.23■□□□□ 0.19
TRIM27-202ENST00000377199 ENPP3O14638 875 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 ANGPT2O15123 496 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 ZNF26P17031 533 aaPredicted RBP16.22■□□□□ 0.19
TRIM27-202ENST00000377199 ZNF37AP17032 561 aaPredicted RBP16.22■□□□□ 0.19
TRIM27-202ENST00000377199 ATP6V1B2P21281 511 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 PRDX3P30048 256 aaKnown RBP16.22■□□□□ 0.19
TRIM27-202ENST00000377199 AGTR2P50052 363 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 GATMP50440 423 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 PLIN5Q00G26 463 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 RHDQ02161 417 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 PLOD1Q02809 727 aaPredicted RBP16.22■□□□□ 0.19
TRIM27-202ENST00000377199 TSNQ15631 228 aaKnown RBP16.22■□□□□ 0.19
TRIM27-202ENST00000377199 MYLK3Q32MK0 819 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 C6orf10Q5SRN2 563 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 RAB44Q7Z6P3 723 aaPredicted RBP16.22■□□□□ 0.19
TRIM27-202ENST00000377199 RTN4RL1Q86UN2 441 aaPredicted RBP16.22■□□□□ 0.19
TRIM27-202ENST00000377199 CCDC117Q8IWD4 279 aaPredicted RBP16.22■□□□□ 0.19
TRIM27-202ENST00000377199 CLYBLQ8N0X4 340 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 OR4L1Q8NH43 312 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 C1orf74Q96LT6 269 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 PRICKLE1Q96MT3 831 aaPredicted RBP16.22■□□□□ 0.19
TRIM27-202ENST00000377199 CCDC68Q9H2F9 335 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 FBXO44Q9H4M3 255 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 OCEL1Q9H607 264 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 ATP13A1Q9HD20 1204 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 CNOT6Q9ULM6 557 aaKnown RBP16.22■□□□□ 0.19
TRIM27-202ENST00000377199 PCDHB5Q9Y5E4 795 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 CLASP2O75122 1294 aaKnown RBP16.22■□□□□ 0.19
TRIM27-202ENST00000377199 CYBAP13498 195 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 CAPN3P20807 821 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 DSC3Q14574 896 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 MFSD14CQ5VZR4 134 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 ZBTB49Q6ZSB9 765 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 TICAM1Q8IUC6 712 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 SCML4Q8N228 414 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 OR4K2Q8NGD2 314 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms