RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.79■□□□□ 0.28
HLA-A-202ENST00000376806 C5orf67F2Z3F1 127 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 STX7O15400 261 aaKnown RBP16.79■□□□□ 0.28
HLA-A-202ENST00000376806 PIGNO95427 931 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 EPCAMP16422 314 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 HNRNPH1P31943 449 aaKnown RBP16.79■□□□□ 0.28
HLA-A-202ENST00000376806 MC4RP32245 332 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 MAPK8P45983 427 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 CCR10P46092 362 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 CSNK1DP48730 415 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 DNAJB13P59910 316 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 TBCCQ15814 346 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 PITRM1Q5JRX3 1037 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 CFAP157Q5JU67 520 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 TREML1Q86YW5 311 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 PARP9Q8IXQ6 854 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 TCF12Q99081 682 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 CCDC106Q9BWC9 280 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 EVLQ9UI08 416 aaPredicted RBP16.79■□□□□ 0.28
HLA-A-202ENST00000376806 APOBEC2Q9Y235 224 aaKnown RBP16.79■□□□□ 0.28
HLA-A-202ENST00000376806 STK38LQ9Y2H1 464 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 CDH23Q9H251 3354 aa16.79■□□□□ 0.28
HLA-A-202ENST00000376806 UBA6A0AVT1 1052 aaPredicted RBP16.78■□□□□ 0.28
HLA-A-202ENST00000376806 NPHS1O60500 1241 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 ARHGEF15O94989 841 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 IGSF6O95976 241 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 MYOGP15173 224 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 HK2P52789 917 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 PRKAA1Q13131 559 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 CAMK1Q14012 370 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 ARL13AQ5H913 290 aaPredicted RBP16.78■□□□□ 0.28
HLA-A-202ENST00000376806 VWA5B1Q5TIE3 1220 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 CAMK1DQ8IU85 385 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 PIH1D2Q8WWB5 315 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 CCDC126Q96EE4 140 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 CHD7Q9P2D1 2997 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 CHD9Q3L8U1 2897 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 CXorf51AA0A1B0GTR3 108 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 NEMP2A6NFY4 417 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 A8MT66 165 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 H7C0S8 307 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 GRM6O15303 877 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 DIAPH2O60879 1101 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 CLASP2O75122 1294 aaKnown RBP16.78■□□□□ 0.28
HLA-A-202ENST00000376806 SOCS5O75159 536 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 NDUFS3O75489 264 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 ZNF821O75541 412 aaPredicted RBP16.78■□□□□ 0.28
HLA-A-202ENST00000376806 PRAMEF12O95522 483 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 ESRRAP11474 423 aaPredicted RBP16.78■□□□□ 0.28
HLA-A-202ENST00000376806 ZNF37AP17032 561 aaPredicted RBP16.78■□□□□ 0.28
HLA-A-202ENST00000376806 CTPS1P17812 591 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 TFEBP19484 476 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 RPL26P61254 145 aaKnown RBP16.78■□□□□ 0.28
HLA-A-202ENST00000376806 BCL2L1Q07817 233 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 FUT11Q495W5 492 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 PSAPL1Q6NUJ1 521 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 EPGNQ6UW88 154 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 PIWIL4Q7Z3Z4 852 aaKnown RBP16.78■□□□□ 0.28
HLA-A-202ENST00000376806 LSMEM2Q8N112 164 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 CCNYL1Q8N7R7 359 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 LEMD2Q8NC56 503 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 AGR3Q8TD06 166 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 TBC1D10AQ9BXI6 508 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 MTIF3Q9H2K0 278 aaKnown RBP16.78■□□□□ 0.28
HLA-A-202ENST00000376806 TNKS2Q9H2K2 1166 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 TLE6Q9H808 572 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 COG4Q9H9E3 785 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 MAGEE1Q9HCI5 957 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 BPIFA1Q9NP55 256 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 TDP1Q9NUW8 608 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 RPL26L1Q9UNX3 145 aaKnown RBP16.78■□□□□ 0.28
HLA-A-202ENST00000376806 SORCS3Q9UPU3 1222 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 VPS9D1Q9Y2B5 631 aa16.78■□□□□ 0.28
HLA-A-202ENST00000376806 A0A0U1RQS6 177 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 HTRA2O43464 458 aaPredicted RBP16.77■□□□□ 0.27
HLA-A-202ENST00000376806 XYLBO75191 536 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 PENKP01210 267 aaPredicted RBP16.77■□□□□ 0.27
HLA-A-202ENST00000376806 ENO1P06733 434 aaKnown RBP16.77■□□□□ 0.27
HLA-A-202ENST00000376806 HNRNPA1P09651 372 aaKnown RBP eCLIP16.77■□□□□ 0.27
HLA-A-202ENST00000376806 ALPIP09923 528 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 SRCP12931 536 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 CD1DP15813 335 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 HLA-FP30511 346 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 SERPINB5P36952 375 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 CTSOP43234 321 aaPredicted RBP16.77■□□□□ 0.27
HLA-A-202ENST00000376806 CDKN1CP49918 316 aaPredicted RBP16.77■□□□□ 0.27
HLA-A-202ENST00000376806 RPL14P50914 215 aaKnown RBP16.77■□□□□ 0.27
HLA-A-202ENST00000376806 NTHL1P78549 312 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 SLC20A2Q08357 652 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 PDAP1Q13442 181 aaKnown RBP16.77■□□□□ 0.27
HLA-A-202ENST00000376806 PEX6Q13608 980 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 UBAP2LQ14157 1087 aaKnown RBP16.77■□□□□ 0.27
HLA-A-202ENST00000376806 PRSS36Q5K4E3 855 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 TRIM67Q6ZTA4 783 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 LYSMD3Q7Z3D4 306 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 PIANPQ8IYJ0 282 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 GPR63Q9BZJ6 419 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 ALG9Q9H6U8 611 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 NCKIPSDQ9NZQ3 722 aa16.77■□□□□ 0.27
HLA-A-202ENST00000376806 IL17CQ9P0M4 197 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms