RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 GJC1P36383 396 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 ILF3Q12906 894 aaKnown RBP eCLIP21.02■□□□□ 0.96
VSX1-201ENST00000376707 HLTFQ14527 1009 aaKnown RBP eCLIP21.02■□□□□ 0.96
VSX1-201ENST00000376707 TAF1BQ53T94 588 aaPredicted RBP21.02■□□□□ 0.96
VSX1-201ENST00000376707 Q6ZVL8 140 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 TSPAN33Q86UF1 283 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 NDUFAF2Q8N183 169 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 CBARPQ8N350 705 aaPredicted RBP21.02■□□□□ 0.96
VSX1-201ENST00000376707 ZNF564Q8TBZ8 553 aaPredicted RBP21.02■□□□□ 0.96
VSX1-201ENST00000376707 MCCC1Q96RQ3 725 aaPredicted RBP21.02■□□□□ 0.96
VSX1-201ENST00000376707 DNAJC7Q99615 494 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 SEMA3CQ99985 751 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 GSDMCQ9BYG8 508 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 POLR1EQ9GZS1 481 aaKnown RBP21.02■□□□□ 0.96
VSX1-201ENST00000376707 WDR70Q9NW82 654 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 ATXN7L1Q9ULK2 861 aaPredicted RBP21.02■□□□□ 0.96
VSX1-201ENST00000376707 BPTFQ12830 3046 aa21.02■□□□□ 0.95
VSX1-201ENST00000376707 CBFA2T2O43439 604 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 NUDT21O43809 227 aaKnown RBP21.01■□□□□ 0.95
VSX1-201ENST00000376707 MFSD11O43934 449 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 CEACAM5P06731 702 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 JMJD7P0C870 316 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 GNPDA1P46926 289 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 CDK3Q00526 305 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 TRIM14Q14142 442 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 PTPRRQ15256 657 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 SLC18A3Q16572 532 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 ASTE1Q2TB18 679 aaPredicted RBP21.01■□□□□ 0.95
VSX1-201ENST00000376707 SPRED1Q7Z699 444 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 JAMLQ86YT9 394 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 TEX26Q8N6G2 289 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 OR8K1Q8NGG5 319 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 GPBAR1Q8TDU6 330 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 FRMD8Q9BZ67 464 aaPredicted RBP21.01■□□□□ 0.95
VSX1-201ENST00000376707 HAUS2Q9NVX0 235 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 TRNAU1APQ9NX07 287 aaKnown RBP21.01■□□□□ 0.95
VSX1-201ENST00000376707 PCDHGA7Q9Y5G6 932 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 SHROOM3Q8TF72 1996 aa21.01■□□□□ 0.95
VSX1-201ENST00000376707 C1QL1O75973 258 aa21■□□□□ 0.95
VSX1-201ENST00000376707 HGFP14210 728 aa21■□□□□ 0.95
VSX1-201ENST00000376707 GARSP41250 739 aaKnown RBP21■□□□□ 0.95
VSX1-201ENST00000376707 ARSEP51690 589 aa21■□□□□ 0.95
VSX1-201ENST00000376707 GALNT2Q10471 571 aa21■□□□□ 0.95
VSX1-201ENST00000376707 CLN3Q13286 438 aa21■□□□□ 0.95
VSX1-201ENST00000376707 DPYSL3Q14195 570 aa21■□□□□ 0.95
VSX1-201ENST00000376707 TIGD7Q6NT04 549 aaPredicted RBP21■□□□□ 0.95
VSX1-201ENST00000376707 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21■□□□□ 0.95
VSX1-201ENST00000376707 KCTD6Q8NC69 237 aa21■□□□□ 0.95
VSX1-201ENST00000376707 ZDHHC1Q8WTX9 485 aa21■□□□□ 0.95
VSX1-201ENST00000376707 PIH1D2Q8WWB5 315 aa21■□□□□ 0.95
VSX1-201ENST00000376707 SPATS2LQ9NUQ6 558 aaKnown RBP21■□□□□ 0.95
VSX1-201ENST00000376707 CTTNBP2NLQ9P2B4 639 aa21■□□□□ 0.95
VSX1-201ENST00000376707 UVRAGQ9P2Y5 699 aa21■□□□□ 0.95
VSX1-201ENST00000376707 PISDQ9UG56 409 aa21■□□□□ 0.95
VSX1-201ENST00000376707 SUFUQ9UMX1 484 aa21■□□□□ 0.95
VSX1-201ENST00000376707 SSUH2Q9Y2M2 353 aa21■□□□□ 0.95
VSX1-201ENST00000376707 PPIL1Q9Y3C6 166 aa21■□□□□ 0.95
VSX1-201ENST00000376707 TTLL3Q9Y4R7 772 aa21■□□□□ 0.95
VSX1-201ENST00000376707 PROSCO94903 275 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 PDHA1P08559 390 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 TEAD1P28347 426 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 SLC5A2P31639 672 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 GPR1P46091 355 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 EPHB1P54762 984 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 PAFAH1B3Q15102 231 aaKnown RBP20.99■□□□□ 0.95
VSX1-201ENST00000376707 ATP13A4Q4VNC1 1196 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 LRRC66Q68CR7 880 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 NCBP2-AS2Q69YL0 99 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 PCSK4Q6UW60 755 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 CCDC81Q6ZN84 652 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 NRROSQ86YC3 692 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 ZNF670Q9BS34 389 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 TAAR2Q9P1P5 351 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 CD84Q9UIB8 345 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 LCMT1Q9UIC8 334 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 LOXL2Q9Y4K0 774 aa20.99■□□□□ 0.95
VSX1-201ENST00000376707 SSU72P8A0A1W2PR75 194 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 RHPN2P1A8MT19 583 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 AGRPO00253 132 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 MATN3O15232 486 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 FZD6O60353 706 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 MAP3K6O95382 1288 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 FUCA1P04066 466 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 FGF1P05230 155 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 H2AFZP0C0S5 128 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 MAZP56270 477 aaKnown RBP20.98■□□□□ 0.95
VSX1-201ENST00000376707 CFHR1Q03591 330 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 ZFP36L1Q07352 338 aaKnown RBP20.98■□□□□ 0.95
VSX1-201ENST00000376707 DPTQ07507 201 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 BIRC2Q13490 618 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 PDK2Q15119 407 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 IFI16Q16666 785 aaKnown RBP20.98■□□□□ 0.95
VSX1-201ENST00000376707 MAP9Q49MG5 647 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 ANKRD20A8PQ5CZ79 823 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 DOK6Q6PKX4 331 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 SLC30A9Q6PML9 568 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 H2AFVQ71UI9 128 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 TECPR1Q7Z6L1 1165 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 VSTM4Q8IW00 320 aa20.98■□□□□ 0.95
VSX1-201ENST00000376707 MAP7D3Q8IWC1 876 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms