RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 TSGA13Q96PP4 275 aa14.13□□□□□ -0.15
CLCNKA-202ENST00000375692 GPATCH1Q9BRR8 931 aaKnown RBP14.13□□□□□ -0.15
CLCNKA-202ENST00000375692 RPF2Q9H7B2 306 aaKnown RBP14.13□□□□□ -0.15
CLCNKA-202ENST00000375692 SPC25Q9HBM1 224 aa14.13□□□□□ -0.15
CLCNKA-202ENST00000375692 AGPAT4Q9NRZ5 378 aa14.13□□□□□ -0.15
CLCNKA-202ENST00000375692 CMTM6Q9NX76 183 aa14.13□□□□□ -0.15
CLCNKA-202ENST00000375692 TRIM64CA6NLI5 447 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 ANXA9O76027 345 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 INHAP05111 366 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 DNAJB2P25686 324 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 FOXA1P55317 472 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 SH3BP2P78314 561 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 SLC36A3Q495N2 470 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 PM20D1Q6GTS8 502 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 CCSAPQ6IQ19 270 aaPredicted RBP14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 HACD2Q6Y1H2 254 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 BHLHA9Q7RTU4 235 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 TOP6BLQ8N6T0 577 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 PCYOX1LQ8NBM8 494 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 MRGPRX2Q96LB1 330 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 SLC39A8Q9C0K1 460 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 POLR1BQ9H9Y6 1135 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 RBM22Q9NW64 420 aaKnown RBP eCLIP14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 ZNHIT2Q9UHR6 403 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 TRIM17Q9Y577 477 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 PTCH2Q9Y6C5 1203 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 CLOCKO15516 846 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 MAFKO60675 156 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 ZNF189O75820 626 aaPredicted RBP14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 SIX3O95343 332 aaPredicted RBP14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 DARSP14868 501 aaKnown RBP14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 IMPDH1P20839 514 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 IL10P22301 178 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 VARSP26640 1264 aaKnown RBP14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 CDKN2DP55273 166 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 RAB39AQ14964 217 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 PLCL1Q15111 1095 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 UGT3A2Q3SY77 523 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 UNC50Q53HI1 259 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 INTS11Q5TA45 600 aaKnown RBP14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 HECTD2Q5U5R9 776 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 DCLRE1AQ6PJP8 1040 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 KLHDC8BQ8IXV7 354 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 RYBPQ8N488 228 aaPredicted RBP14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 KLHDC9Q8NEP7 349 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 HDAC10Q969S8 669 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 CCDC126Q96EE4 140 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 PGAP3Q96FM1 320 aaPredicted RBP14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 KATNAL1Q9BW62 490 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 CNGB3Q9NQW8 809 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 TUBA8Q9NY65 449 aaPredicted RBP14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 DNAJC15Q9Y5T4 150 aa14.12□□□□□ -0.15
CLCNKA-202ENST00000375692 EI24O14681 340 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 ACOX3O15254 700 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 NCK1P16333 377 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 PAMP19021 973 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 BDNFP23560 247 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 CCNCP24863 283 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 FASP25445 335 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 HOXC8P31273 242 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 CCR3P51677 355 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 TNK2Q07912 1038 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 AARS2Q5JTZ9 985 aaKnown RBP14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 ZNF678Q5SXM1 525 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 UBXN11Q5T124 520 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 KIAA0930Q6ICG6 404 aaPredicted RBP14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 RANBP10Q6VN20 620 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 OR52K2Q8NGK3 314 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 ZUFSPQ96AP4 578 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 ROPN1LQ96C74 230 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 UBXN10Q96LJ8 280 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 KCNA7Q96RP8 456 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 ANKRD12Q6UB98 2062 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 OR51F1A6NGY5 319 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 FXYD1O00168 92 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 GABRDO14764 452 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 INPP4BO15327 924 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 F9P00740 461 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 RBP1P09455 135 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 CTSHP09668 335 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 KCNE1P15382 129 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 ACADVLP49748 655 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 BNIP3Q12983 259 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 INPP5AQ14642 412 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 ACAP2Q15057 778 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 NEDD8Q15843 81 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 GEN1Q17RS7 908 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 OGFOD2Q6N063 350 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 ISCA2Q86U28 154 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 ADGRG5Q8IZF4 528 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 ADAMTS16Q8TE57 1224 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 IL12RB2Q99665 862 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 TMEM165Q9HC07 324 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 SLC38A7Q9NVC3 462 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 DOLKQ9UPQ8 538 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 FADS3Q9Y5Q0 445 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 V9GYQ6 96 aa14.11□□□□□ -0.15
CLCNKA-202ENST00000375692 RALGAPA2Q2PPJ7 1873 aa14.1□□□□□ -0.15
CLCNKA-202ENST00000375692 TTC24A2A3L6 582 aaPredicted RBP14.1□□□□□ -0.15
CLCNKA-202ENST00000375692 MEIS3P2A8K0S8 358 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms