RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 DONSONQ9NYP3 566 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 SEPT10Q9P0V9 454 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 DOLKQ9UPQ8 538 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 UNC13CQ8NB66 2214 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 hCG_1818297A0A087WSY0 165 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 D6RAR5 112 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 TERTO14746 1132 aaKnown RBP12.22□□□□□ -0.45
LSM2-208ENST00000375661 KDELR3O43731 214 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 MFSD11O43934 449 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 POP4O95707 220 aaKnown RBP12.22□□□□□ -0.45
LSM2-208ENST00000375661 PYGMP11217 842 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 UGT1A5P35504 534 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 SUOXP51687 545 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 GBE1Q04446 702 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 SERINC3Q13530 473 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 PARP15Q460N3 678 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 AADACL2Q6P093 401 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 ARHGAP36Q6ZRI8 547 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 C17orf53Q8N3J3 647 aaPredicted RBP12.22□□□□□ -0.45
LSM2-208ENST00000375661 RYBPQ8N488 228 aaPredicted RBP12.22□□□□□ -0.45
LSM2-208ENST00000375661 TP53I13Q8NBR0 393 aaPredicted RBP12.22□□□□□ -0.45
LSM2-208ENST00000375661 TRIM58Q8NG06 486 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 RBM41Q96IZ5 413 aaKnown RBP12.22□□□□□ -0.45
LSM2-208ENST00000375661 GFM1Q96RP9 751 aaKnown RBP12.22□□□□□ -0.45
LSM2-208ENST00000375661 TM6SF2Q9BZW4 377 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 CLPBQ9H078 707 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 SYNDIG1Q9H7V2 258 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 EPB41L5Q9HCM4 733 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 KCND1Q9NSA2 647 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 HPCAL4Q9UM19 191 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 ACTL7AQ9Y615 435 aa12.22□□□□□ -0.45
LSM2-208ENST00000375661 NAV2Q8IVL1 2488 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 ANKRD36A6QL64 1941 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 ZSCAN5CA6NGD5 496 aaPredicted RBP12.21□□□□□ -0.45
LSM2-208ENST00000375661 KRIT1O00522 736 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 NOBOXO60393 691 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 PAPOLAP51003 745 aaKnown RBP12.21□□□□□ -0.45
LSM2-208ENST00000375661 HK3P52790 923 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 COPS2P61201 443 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 RAD51Q06609 339 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 SLC10A2Q12908 348 aaPredicted RBP12.21□□□□□ -0.45
LSM2-208ENST00000375661 PPP2R5EQ16537 467 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 MYLK3Q32MK0 819 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 ODF2Q5BJF6 829 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 LEKR1Q6ZMV7 388 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 TTC7BQ86TV6 843 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 GKN2Q86XP6 184 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 RFX6Q8HWS3 928 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 UBL4BQ8N7F7 174 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 ATL2Q8NHH9 583 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 CXorf40AQ8TE69 158 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 UBE2Q2Q8WVN8 375 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 CCDC74AQ96AQ1 378 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 TLR10Q9BXR5 811 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 MAK16Q9BXY0 300 aaKnown RBP12.21□□□□□ -0.45
LSM2-208ENST00000375661 B3GNT4Q9C0J1 378 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 DKK3Q9UBP4 350 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 GGT7Q9UJ14 662 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 PNMA8BQ9ULN7 279 aaPredicted RBP12.21□□□□□ -0.45
LSM2-208ENST00000375661 ITM2BQ9Y287 266 aa12.21□□□□□ -0.45
LSM2-208ENST00000375661 PIEZO2Q9H5I5 2752 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 GOLGA6L9A6NEM1 432 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 ARHGAP42A6NI28 874 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 J3KR12 359 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 DFFAO00273 331 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 APOL1O14791 398 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 SUV39H1O43463 412 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 CST8O60676 142 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 PRAMEF11O60813 436 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 RASGRP1O95267 797 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 MAP3K6O95382 1288 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 RPLP0P05388 317 aaKnown RBP12.2□□□□□ -0.46
LSM2-208ENST00000375661 UGT2B4P06133 528 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 JMJD7P0C870 316 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 CTSEP14091 401 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 PNLIPP16233 465 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 ITGB6P18564 788 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 CD82P27701 267 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 HTR1BP28222 390 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 PTPN7P35236 360 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 SERPINB6P35237 376 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 GALNT2Q10471 571 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 RPS6KA1Q15418 735 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 TFDP3Q5H9I0 405 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 ZNF569Q5MCW4 686 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 KAZNQ674X7 775 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 NPNTQ6UXI9 565 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 GDPD4Q6W3E5 623 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 B3GNT8Q7Z7M8 397 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 ZNF354CQ86Y25 554 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 JAMLQ86YT9 394 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 CCDC50Q8IVM0 306 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 SLC35F6Q8N357 371 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 ZSCAN1Q8NBB4 408 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 KYQ8NBH2 561 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 OR6K2Q8NGY2 324 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.2□□□□□ -0.46
LSM2-208ENST00000375661 CASKIN2Q8WXE0 1202 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 VOPP1Q96AW1 172 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 KLHL32Q96NJ5 620 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms