RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 FCRL3Q96P31 734 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-202ENST00000375340 TINF2Q9BSI4 451 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 CCDC28BQ9BUN5 200 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 VPS45Q9NRW7 570 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 COPG1Q9Y678 874 aaKnown RBP6.54□□□□□ -1.36
SMC1A-202ENST00000375340 ALDH1A1P00352 501 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 ADRA1BP35368 520 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 ARMCX4Q5H9R4 360 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 ASRGL1Q7L266 308 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 PROSER1Q86XN7 944 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 ZC3H7AQ8IWR0 971 aaKnown RBP6.54□□□□□ -1.36
SMC1A-202ENST00000375340 SVOPQ8N4V2 548 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 WDTC1Q8N5D0 677 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 OR4A15Q8NGL6 344 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 PHF21AQ96BD5 680 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 ASB2Q96Q27 587 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 KLHL20Q9Y2M5 609 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 DYRK1BQ9Y463 629 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 ADAMTS7Q9UKP4 1686 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 PRKCGP05129 697 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 FGF3P11487 239 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-202ENST00000375340 CKBP12277 381 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 LAPTM5Q13571 262 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 DPYSL2Q16555 572 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 DOK6Q6PKX4 331 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 ADHFE1Q8IWW8 467 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 MTERF3Q96E29 417 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 BCO2Q9BYV7 579 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 PRDM16Q9HAZ2 1276 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 ATAD3AQ9NVI7 634 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 TPRKBQ9Y3C4 175 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 FADS3Q9Y5Q0 445 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 LRG1P02750 347 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 HLA-DQB2P05538 268 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 HPCAL1P37235 193 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 FCGRTP55899 365 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 NAA20P61599 178 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 HIST2H2ACQ16777 129 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-202ENST00000375340 HIST2H2AA3Q6FI13 130 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 CLIP4Q8N3C7 705 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 FOCADQ5VW36 1801 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 ABCA3Q99758 1704 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 FAM25AB3EWG3 89 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 FAM25CB3EWG5 89 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 FAM25GB3EWG6 89 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 PGK1P00558 417 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 TCEAL1Q15170 157 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 TCEA2Q15560 299 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 ZCCHC8Q6NZY4 707 aaKnown RBP6.54□□□□□ -1.36
SMC1A-202ENST00000375340 OLFML1Q6UWY5 402 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 CXCL17Q6UXB2 119 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 RNF19BQ6ZMZ0 732 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 CDHR3Q6ZTQ4 885 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 STRADAQ7RTN6 431 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 OR52E6Q96RD3 313 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 TRIM45Q9H8W5 580 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-202ENST00000375340 EIF2B3Q9NR50 452 aaKnown RBP6.54□□□□□ -1.36
SMC1A-202ENST00000375340 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.54□□□□□ -1.366e-7■■□□□ 13.7
SMC1A-202ENST00000375340 H2AFY2Q9P0M6 372 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-202ENST00000375340 COL4A1P02462 1669 aa6.54□□□□□ -1.36
SMC1A-202ENST00000375340 TOR1BO14657 336 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 LRIG2O94898 1065 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 FMO3P31513 532 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ZNF132P52740 706 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 RPS7P62081 194 aaKnown RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 NAPRTQ6XQN6 538 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 FBXL18Q96ME1 805 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 FAM126AQ9BYI3 521 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 TRIM8Q9BZR9 551 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 PIGVQ9NUD9 493 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 A0A088AWK7 358 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 RFPL1O75677 317 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CABYRO75952 493 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 SEC24AO95486 1093 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 MLYCDO95822 493 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CDH3P22223 829 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CES1P23141 567 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ICAM3P32942 547 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 PTPN9P43378 593 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 MTPNP58546 118 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ACOX1Q15067 660 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 EMC10Q5UCC4 262 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 LINGO4Q6UY18 593 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ATG14Q6ZNE5 492 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CACUL1Q86Y37 369 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CLYBLQ8N0X4 340 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 GALNT15Q8N3T1 639 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ESAMQ96AP7 390 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 EBPLQ9BY08 206 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 TM6SF2Q9BZW4 377 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 SLC39A8Q9C0K1 460 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 HDHD2Q9H0R4 259 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ADPRHL2Q9NX46 363 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 FBXW11Q9UKB1 542 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 IKZF3Q9UKT9 509 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 DERAQ9Y315 318 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 LRRC42Q9Y546 428 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CXCL11O14625 94 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 MSCO60682 206 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 OR6B1O95007 311 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms