RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 PIH1D2Q8WWB5 315 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RILPQ96NA2 401 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SMIM14Q96QK8 99 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TLE6Q9H808 572 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 APOBEC2Q9Y235 224 aaKnown RBP17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ZNF711Q9Y462 761 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PCDHB9Q9Y5E1 797 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 STX7O15400 261 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ZNF821O75541 412 aaPredicted RBP17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 IRS1P35568 1242 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 EPHB1P54762 984 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 NAGLUP54802 743 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 USP4Q13107 963 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RIPK1Q13546 671 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PITRM1Q5JRX3 1037 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 EFHBQ8N7U6 833 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TXNDC5Q8NBS9 432 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ISG20Q96AZ6 181 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CCDC106Q9BWC9 280 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TM6SF2Q9BZW4 377 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TDP1Q9NUW8 608 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 IL17CQ9P0M4 197 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 FKBPLQ9UIM3 349 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 HS3ST2Q9Y278 367 aa17.98■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PFDN6O15212 129 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 GRM6O15303 877 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CSPG5O95196 566 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 EPCAMP16422 314 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ZNF37AP17032 561 aaPredicted RBP17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CD9P21926 228 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 HMGCLP35914 325 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TTPAP49638 278 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 BCL2L1Q07817 233 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ZNF77Q15935 545 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SLC5A9Q2M3M2 681 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 AARS2Q5JTZ9 985 aaKnown RBP17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PDE12Q6L8Q7 609 aaKnown RBP17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 EPGNQ6UW88 154 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PIM3Q86V86 326 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 MICAL1Q8TDZ2 1067 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ZDHHC7Q9NXF8 308 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 NCKIPSDQ9NZQ3 722 aa17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 EVLQ9UI08 416 aaPredicted RBP17.97■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SLCO1B7G3V0H7 640 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 NDUFS3O75489 264 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PIGNO95427 931 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CHRNGP07510 517 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PRSS56P0CW18 603 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SRCP12931 536 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 HLA-FP30511 346 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 MC4RP32245 332 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RPL14P50914 215 aaKnown RBP17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PEX6Q13608 980 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ARL13AQ5H913 290 aaPredicted RBP17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CAMK1DQ8IU85 385 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SLC22A9Q8IVM8 553 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PARP9Q8IXQ6 854 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 LSMEM2Q8N112 164 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 OR2AP1Q8NGE2 309 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 UTP4Q969X6 686 aaKnown RBP17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 POMKQ9H5K3 350 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ATP13A3Q9H7F0 1226 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ARMCX1Q9P291 453 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TBC1D14Q9P2M4 693 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 DPP7Q9UHL4 492 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 A0A0J9YYE9 177 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 A8MT66 165 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 F8W8V4 182 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 MATN2O00339 956 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 IPO13O94829 963 aaKnown RBP17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TRBC1P01850 177 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SLC4A1P02730 911 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CD1DP15813 335 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TFEBP19484 476 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 AOC1P19801 751 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 MPSTP25325 297 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 HNRNPH1P31943 449 aaKnown RBP17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ADARP55265 1226 aaKnown RBP17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 XIAPP98170 497 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 NFKB2Q00653 900 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 FUT11Q495W5 492 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ISCA2Q86U28 154 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TREML1Q86YW5 311 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 OTUB2Q96DC9 234 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CNDP1Q96KN2 507 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TBC1D10AQ9BXI6 508 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 UNKQ9C0B0 810 aaKnown RBP17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CEP44Q9C0F1 390 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 COG4Q9H9E3 785 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 VTI1BQ9UEU0 232 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 MED16Q9Y2X0 877 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PKP3Q9Y446 797 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 COMMD10Q9Y6G5 202 aa17.96■□□□□ 0.47
HLA-DQB1-201ENST00000374943 HDAC3O15379 428 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ARHGEF15O94989 841 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PRAMEF12O95522 483 aa17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ESRRAP11474 423 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ALDH18A1P54886 795 aaKnown RBP17.95■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SNRPD1P62314 119 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms