RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 H3BNC9 293 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 TM7SF2O76062 418 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 FGF1P05230 155 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 COX4I1P13073 169 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 NCF1P14598 390 aaPredicted RBP18.29■□□□□ 0.52
RXRB-202ENST00000374685 HLA-DPA1P20036 260 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 CPOXP36551 454 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 CSRP3P50461 194 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 CYP4F8P98187 520 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 DNAL1Q4LDG9 190 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 ADGRF1Q5T601 910 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 C6orf163Q5TEZ5 329 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 ZNF549Q6P9A3 640 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 KIAA0408Q6ZU52 694 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 ACAD11Q709F0 780 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 OR4L1Q8NH43 312 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 GABPB2Q8TAK5 448 aaPredicted RBP18.29■□□□□ 0.52
RXRB-202ENST00000374685 RDH11Q8TC12 318 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 C2orf15Q8WU43 125 aaKnown RBP18.29■□□□□ 0.52
RXRB-202ENST00000374685 CDYLQ9Y232 598 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 K7ERQ8 282 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 SIX3O95343 332 aaPredicted RBP18.29■□□□□ 0.52
RXRB-202ENST00000374685 ATP5F1P24539 256 aaPredicted RBP18.29■□□□□ 0.52
RXRB-202ENST00000374685 TECRLQ5HYJ1 363 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 FAM91A1Q658Y4 838 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 TPGS1Q6ZTW0 290 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 HPS6Q86YV9 775 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 CCDC117Q8IWD4 279 aaPredicted RBP18.29■□□□□ 0.52
RXRB-202ENST00000374685 SCG3Q8WXD2 468 aaKnown RBP18.29■□□□□ 0.52
RXRB-202ENST00000374685 CMTM5Q96DZ9 223 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 FEM1CQ96JP0 617 aa18.29■□□□□ 0.52
RXRB-202ENST00000374685 FNDC1Q4ZHG4 1894 aaPredicted RBP18.29■□□□□ 0.52
RXRB-202ENST00000374685 INSIG1O15503 277 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 CLDN11O75508 207 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 NDST3O95803 873 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 COL6A2P12110 1019 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 CTPS1P17812 591 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 SEMG2Q02383 582 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 TBCCQ15814 346 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 LRRC36Q1X8D7 754 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 MRNIPQ6NTE8 343 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 OTOP2Q7RTS6 562 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 BRSK1Q8TDC3 778 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 PYDC1Q8WXC3 89 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 CDKN2AIPNLQ96HQ2 116 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 ZNF558Q96NG5 402 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 CCDC28BQ9BUN5 200 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 STN1Q9H668 368 aaKnown RBP18.28■□□□□ 0.52
RXRB-202ENST00000374685 PAK6Q9NQU5 681 aaPredicted RBP18.28■□□□□ 0.52
RXRB-202ENST00000374685 PPP6CO00743 305 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 H2AFYO75367 372 aaKnown RBP18.28■□□□□ 0.52
RXRB-202ENST00000374685 URODP06132 367 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 CSF2RAP15509 400 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 ALOX15P16050 662 aaPredicted RBP18.28■□□□□ 0.52
RXRB-202ENST00000374685 GKP32189 559 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 ZXDBP98169 803 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 PDAP1Q13442 181 aaKnown RBP18.28■□□□□ 0.52
RXRB-202ENST00000374685 CNPY1Q3B7I2 92 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 MDGA1Q8NFP4 955 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 WFDC5Q8TCV5 224 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 PTERQ96BW5 349 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 TSPAN17Q96FV3 270 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 SMG9Q9H0W8 520 aaKnown RBP18.28■□□□□ 0.52
RXRB-202ENST00000374685 ZNF334Q9HCZ1 680 aaPredicted RBP18.28■□□□□ 0.52
RXRB-202ENST00000374685 RAI2Q9Y5P3 530 aa18.28■□□□□ 0.52
RXRB-202ENST00000374685 A0A088AWK7 358 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 A0A1B0GVM2 712 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 TCAF2A6NFQ2 919 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 RPP40O75818 363 aaKnown RBP18.27■□□□□ 0.52
RXRB-202ENST00000374685 SOD2P04179 222 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 CYTH1Q15438 398 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 PPP1R3AQ16821 1122 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 PDZD8Q8NEN9 1154 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 PSKH2Q96QS6 385 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 CFHR5Q9BXR6 569 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 IPO13O94829 963 aaKnown RBP18.27■□□□□ 0.52
RXRB-202ENST00000374685 RHOBTB1O94844 696 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 TMCC1O94876 653 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 CKMP06732 381 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 PIK3R1P27986 724 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 KPNA2P52292 529 aaKnown RBP18.27■□□□□ 0.52
RXRB-202ENST00000374685 CDH18Q13634 790 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 SLC26A7Q8TE54 656 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 LZICQ8WZA0 190 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 USP13Q92995 863 aaPredicted RBP18.27■□□□□ 0.52
RXRB-202ENST00000374685 RANBP9Q96S59 729 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 CDK5RAP1Q96SZ6 601 aaKnown RBP18.27■□□□□ 0.52
RXRB-202ENST00000374685 MGME1Q9BQP7 344 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 PCDHB9Q9Y5E1 797 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 CPQQ9Y646 472 aa18.27■□□□□ 0.52
RXRB-202ENST00000374685 DOCK6Q96HP0 2047 aa18.27■□□□□ 0.51
RXRB-202ENST00000374685 UBXN8O00124 270 aa18.27■□□□□ 0.51
RXRB-202ENST00000374685 KDELR3O43731 214 aa18.27■□□□□ 0.51
RXRB-202ENST00000374685 OR1I1O60431 355 aa18.27■□□□□ 0.51
RXRB-202ENST00000374685 ATP6V1G1O75348 118 aa18.27■□□□□ 0.51
RXRB-202ENST00000374685 ENO3P13929 434 aaPredicted RBP18.27■□□□□ 0.51
RXRB-202ENST00000374685 ITGAXP20702 1163 aa18.27■□□□□ 0.51
RXRB-202ENST00000374685 ARF5P84085 180 aa18.27■□□□□ 0.51
RXRB-202ENST00000374685 TBL3Q12788 808 aaKnown RBP18.27■□□□□ 0.51
RXRB-202ENST00000374685 LSAMPQ13449 338 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms