RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SDCCAG8Q86SQ7 713 aaPredicted RBP12.11□□□□□ -0.47
HMGCL-202ENST00000374487 AFAP1L2Q8N4X5 818 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 ACTRT2Q8TDY3 377 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 DNAJC1Q96KC8 554 aaKnown RBP12.11□□□□□ -0.47
HMGCL-202ENST00000374487 CEP295NLQ96MC4 621 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 OSBPL1AQ9BXW6 950 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 PDFQ9HBH1 243 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 THEGQ9P2T0 379 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 MTRRQ9UBK8 725 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 UBA2Q9UBT2 640 aaPredicted RBP12.11□□□□□ -0.47
HMGCL-202ENST00000374487 HCFC2Q9Y5Z7 792 aa12.11□□□□□ -0.47
HMGCL-202ENST00000374487 BPTFQ12830 3046 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.1□□□□□ -0.47
HMGCL-202ENST00000374487 ZNF840PA6NDX5 716 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 TRPC5OSA6NMA1 111 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 COCHO43405 550 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 CLDN11O75508 207 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 GOT2P00505 430 aaKnown RBP12.1□□□□□ -0.47
HMGCL-202ENST00000374487 PMLP29590 882 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 PPARGP37231 505 aaPredicted RBP12.1□□□□□ -0.47
HMGCL-202ENST00000374487 SCNN1BP51168 640 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 CDKN2DP55273 166 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 ZNF177Q13360 481 aaPredicted RBP12.1□□□□□ -0.47
HMGCL-202ENST00000374487 KCNC3Q14003 757 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 PTPRCAPQ14761 206 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 FAM45BPQ6NSW5 357 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 FAM45AQ8TCE6 357 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 PEX13Q92968 403 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 RMDN1Q96DB5 314 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 PHF21BQ96EK2 531 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 UBXN10Q96LJ8 280 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 RTKNQ9BST9 563 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 HERC2P3Q9BVR0 1158 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 RETREG1Q9H6L5 497 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 MRPL17Q9NRX2 175 aaKnown RBP12.1□□□□□ -0.47
HMGCL-202ENST00000374487 NMRK1Q9NWW6 199 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 TRPM5Q9NZQ8 1165 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 FIS1Q9Y3D6 152 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 ACTL7AQ9Y615 435 aa12.1□□□□□ -0.47
HMGCL-202ENST00000374487 DOCK4Q8N1I0 1966 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 RGSL1A5PLK6 1076 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 A8MT66 165 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 RPP40O75818 363 aaKnown RBP12.09□□□□□ -0.47
HMGCL-202ENST00000374487 PDE5AO76074 875 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 NDST3O95803 873 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 BAG2O95816 211 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 ITGAXP20702 1163 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 ATP6V1C1P21283 382 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 PIK3R1P27986 724 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 HOXD9P28356 352 aaPredicted RBP12.09□□□□□ -0.47
HMGCL-202ENST00000374487 CORO1AP31146 461 aaKnown RBP12.09□□□□□ -0.47
HMGCL-202ENST00000374487 SLC26A3P40879 764 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 PLK1P53350 603 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 PFKPQ01813 784 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 DSG1Q02413 1049 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 TBL3Q12788 808 aaKnown RBP12.09□□□□□ -0.47
HMGCL-202ENST00000374487 ILF2Q12905 390 aaKnown RBP12.09□□□□□ -0.47
HMGCL-202ENST00000374487 COL19A1Q14993 1142 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 SLC14A2Q15849 920 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 C5orf22Q49AR2 442 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 GPR158Q5T848 1215 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 SLC22A9Q8IVM8 553 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 EFHBQ8N7U6 833 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 KDM1BQ8NB78 822 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 ANKRD49Q8WVL7 239 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 OVCA2Q8WZ82 227 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 CCDC124Q96CT7 223 aaKnown RBP12.09□□□□□ -0.47
HMGCL-202ENST00000374487 CATSPER2Q96P56 530 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 PSKH2Q96QS6 385 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 CCDC28BQ9BUN5 200 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 GKN1Q9NS71 199 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 BACE2Q9Y5Z0 518 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 WASF2Q9Y6W5 498 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 CCDC162PA2VCL2 907 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 TMEM233B4DJY2 109 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 CBX4O00257 560 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 AIM2O14862 343 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 MAP3K7O43318 606 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 KDELR3O43731 214 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 CCNT2O60583 730 aaKnown RBP12.09□□□□□ -0.47
HMGCL-202ENST00000374487 FKBP6O75344 327 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 CRTAMO95727 393 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 JUNP05412 331 aaKnown RBP12.09□□□□□ -0.47
HMGCL-202ENST00000374487 URODP06132 367 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 RHOCP08134 193 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 IRF1P10914 325 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 ANPEPP15144 967 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 IL9P15248 144 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 ALDH1A3P47895 512 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 NUDT2P50583 147 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 ACVR1Q04771 509 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 CYLC2Q14093 348 aaPredicted RBP12.09□□□□□ -0.47
HMGCL-202ENST00000374487 KLHDC10Q6PID8 442 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 SNX32Q86XE0 403 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 MYLK4Q86YV6 388 aaPredicted RBP12.09□□□□□ -0.47
HMGCL-202ENST00000374487 SPNS2Q8IVW8 549 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 OR52K2Q8NGK3 314 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 OR13C4Q8NGS5 318 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 OR4L1Q8NH43 312 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 RP9Q8TA86 221 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms