RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 GNPTGQ9UJJ9 305 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 TBC1D24Q9ULP9 559 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 ISM1B1AKI9 464 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 MRPS5P82675 430 aaKnown RBP14.32□□□□□ -0.12
TRAF1-201ENST00000373887 XKR6Q5GH73 641 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.32□□□□□ -0.12
TRAF1-201ENST00000373887 ARMCX6Q7L4S7 300 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 LRRN4CLQ8ND94 238 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 OR4A15Q8NGL6 344 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 SLC47A1Q96FL8 570 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 CLIC5Q9NZA1 410 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 COL20A1Q9P218 1284 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 MTF2Q9Y483 593 aaPredicted RBP14.32□□□□□ -0.12
TRAF1-201ENST00000373887 SMIM28A0A1B0GU29 152 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 DUSP11O75319 330 aaKnown RBP14.32□□□□□ -0.12
TRAF1-201ENST00000373887 ERBB2P04626 1255 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 LINC00032P0C843 101 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 ETS2P15036 469 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 RAB2AP61019 212 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 AMIGO2Q86SJ2 522 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 IFNL1Q8IU54 200 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 KBTBD8Q8NFY9 601 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 CIDEBQ9UHD4 219 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 SSR3Q9UNL2 185 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 SOWAHBA6NEL2 793 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 SNRPB2P08579 225 aaKnown RBP14.32□□□□□ -0.12
TRAF1-201ENST00000373887 COX4I1P13073 169 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 DLG3Q92796 817 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 DNAJC19Q96DA6 116 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 CDADC1Q9BWV3 514 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 DUSP16Q9BY84 665 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 FAM192AQ9GZU8 254 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 ETAA1Q9NY74 926 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 C3P01024 1663 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 APODP05090 189 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 CDK7P50613 346 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 TAS2R41P59536 307 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 RPL7AP62424 266 aaKnown RBP14.32□□□□□ -0.12
TRAF1-201ENST00000373887 SWI5Q1ZZU3 235 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 NEK5Q6P3R8 708 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 LINGO4Q6UY18 593 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 PSTKQ8IV42 348 aaKnown RBP14.32□□□□□ -0.12
TRAF1-201ENST00000373887 OR8D1Q8WZ84 308 aa14.32□□□□□ -0.12
TRAF1-201ENST00000373887 MED1Q15648 1581 aaPredicted RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 NEURL4Q96JN8 1562 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 A0A0X1KG70 313 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 APOC4-APOC2K7ER74 178 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 SLC28A2O43868 658 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 ERAL1O75616 437 aaKnown RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 APOC2P02655 101 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 TCF4P15884 667 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 CORO1AP31146 461 aaKnown RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 CYP4F8P98187 520 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 MAPKAPK3Q16644 382 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 ATAT1Q5SQI0 421 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 PTCHD4Q6ZW05 846 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 CPA6Q8N4T0 437 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 LNX1Q8TBB1 728 aaPredicted RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 CITED4Q96RK1 184 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 FAIM2Q9BWQ8 316 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 L2HGDHQ9H9P8 463 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 ABCB9Q9NP78 766 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 KCNK4Q9NYG8 393 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 AGO1Q9UL18 857 aaKnown RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 DHRS7Q9Y394 339 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 PAGE1O75459 146 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 PCCBP05166 539 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 HTR1BP28222 390 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 GRIA4P48058 902 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 STXBP5Q5T5C0 1151 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 TTC23Q5W5X9 447 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 KYAT3Q6YP21 454 aaKnown RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 C12orf50Q8NA57 414 aaPredicted RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 PIH1D2Q8WWB5 315 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 RERGQ96A58 199 aaPredicted RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 RASSF1Q9NS23 344 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 ADAM28Q9UKQ2 775 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 ARL5CA6NH57 179 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 FADS2O95864 444 aaKnown RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 ELFN1P0C7U0 828 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 PSEN1P49768 467 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 PARP6Q2NL67 630 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 NET1Q7Z628 596 aaPredicted RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 MORF4L1Q9UBU8 362 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 CD84Q9UIB8 345 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 PSMD13Q9UNM6 376 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 RBMX2Q9Y388 322 aaKnown RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 SAMHD1Q9Y3Z3 626 aaKnown RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 RNASEH2AO75792 299 aaKnown RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 CIR1Q86X95 450 aaPredicted RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 FCRL2Q96LA5 508 aaPredicted RBP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRAF1-201ENST00000373887 SAR1AQ9NR31 198 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 PSME2Q9UL46 239 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 PCDHB9Q9Y5E1 797 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 A0A0U1RQJ8 604 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 OPLAHO14841 1288 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 KRT36O76013 467 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 EPHX1P07099 455 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 DBIP07108 87 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms