RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CBLBQ13191 982 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 FASTKQ14296 549 aaKnown RBP11.75□□□□□ -0.53
PDE6C-201ENST00000371447 USP41Q3LFD5 358 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 PSAPL1Q6NUJ1 521 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 PIWIL4Q7Z3Z4 852 aaKnown RBP11.75□□□□□ -0.53
PDE6C-201ENST00000371447 CAMK1DQ8IU85 385 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 MAB21L3Q8N8X9 362 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 MDGA1Q8NFP4 955 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 OR6Y1Q8NGX8 325 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 CEP70Q8NHQ1 597 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 DDI1Q8WTU0 396 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 TMEM169Q96HH4 297 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 ACOX2Q99424 681 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 SLC30A3Q99726 388 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 CEP290O15078 2479 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 E5RI56 91 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 STX7O15400 261 aaKnown RBP11.74□□□□□ -0.53
PDE6C-201ENST00000371447 INSIG1O15503 277 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 SMIM24O75264 130 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 KATNA1O75449 491 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 LEPRP48357 1165 aaKnown RBP11.74□□□□□ -0.53
PDE6C-201ENST00000371447 CDH18Q13634 790 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 RNF220Q5VTB9 566 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 ARMC3Q5W041 872 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 SCML4Q8N228 414 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 CLDN19Q8N6F1 224 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 GABPB2Q8TAK5 448 aaPredicted RBP11.74□□□□□ -0.53
PDE6C-201ENST00000371447 TSPAN17Q96FV3 270 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.74□□□□□ -0.53
PDE6C-201ENST00000371447 SEPT3Q9UH03 358 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 H7C4K7 107 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 MC4RP32245 332 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 MAGEA11P43364 429 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 PIK3CGP48736 1102 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 KPNA2P52292 529 aaKnown RBP11.74□□□□□ -0.53
PDE6C-201ENST00000371447 AQP4P55087 323 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 RHOAP61586 193 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 SH3BP2P78314 561 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 ZNF33AQ06730 810 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 CEACAM7Q14002 265 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 C18orf21Q32NC0 220 aaPredicted RBP11.74□□□□□ -0.53
PDE6C-201ENST00000371447 SFT2D3Q587I9 215 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 BEND5Q7L4P6 421 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 CNTN4Q8IWV2 1026 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 FAM126BQ8IXS8 530 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 NUDT8Q8WV74 236 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 MIEF2Q96C03 454 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 CLSTN3Q9BQT9 956 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 SIKE1Q9BRV8 207 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 C1orf50Q9BV19 199 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 VN1R3Q9BXE9 311 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 GPR63Q9BZJ6 419 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 IKZF3Q9UKT9 509 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 XIRP2A4UGR9 3374 aa11.74□□□□□ -0.53
PDE6C-201ENST00000371447 SLC7A4O43246 635 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 RPP40O75818 363 aaKnown RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 RBP1P09455 135 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 PRDX3P30048 256 aaKnown RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 WEE1P30291 646 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 GCKP35557 465 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 DSG1Q02413 1049 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 CDC16Q13042 620 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 MRPL58Q14197 206 aaKnown RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 PTK2BQ14289 1009 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 CAPRIN1Q14444 709 aaKnown RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 FUT11Q495W5 492 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 FAM151BQ6UXP7 276 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 WFDC5Q8TCV5 224 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 ACTRT2Q8TDY3 377 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 SKA2Q8WVK7 121 aaPredicted RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 MRPL1Q9BYD6 325 aaKnown RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 POLR3BQ9NW08 1133 aaPredicted RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 SORCS3Q9UPU3 1222 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 PSMD12O00232 456 aaPredicted RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 MAP3K13O43283 966 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 NDST3O95803 873 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 NELFEP18615 380 aaKnown RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 EEF1DP29692 281 aaKnown RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 RBBP7Q16576 425 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 POM121L1PQ3SYA9 428 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 TRIM60Q495X7 471 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 ARMC12Q5T9G4 340 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 DHDDSQ86SQ9 333 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 CPNE9Q8IYJ1 553 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 BRSK1Q8TDC3 778 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 LRCH3Q96II8 777 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 APOL5Q9BWW9 433 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 EFCAB1Q9HAE3 211 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 ZNF212Q9UDV6 495 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 AFF4Q9UHB7 1163 aaKnown RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 EVLQ9UI08 416 aaPredicted RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 C2orf81A6NN90 581 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 TMCC1O94876 653 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 LUC7L3O95232 432 aaKnown RBP11.73□□□□□ -0.53
PDE6C-201ENST00000371447 TRIM16O95361 564 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 UGT1A6P19224 532 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 UGT1A1P22309 533 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 UGT1A4P22310 534 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 UGT1A3P35503 534 aa11.73□□□□□ -0.53
PDE6C-201ENST00000371447 UGT1A5P35504 534 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms