RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 OR8H3Q8N146 312 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 DEPDC4Q8N2C3 294 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 MKL1Q969V6 931 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 VAT1Q99536 393 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 EPB41L4BQ9H329 900 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 BCAS3Q9H6U6 928 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 VPS51Q9UID3 782 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 ILVBLA1L0T0 632 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 AURKAO14965 403 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 VTNP04004 478 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 MTHFD1P11586 935 aaKnown RBP12.69□□□□□ -0.38
GPC4-201ENST00000370828 KLF1Q13351 362 aaPredicted RBP12.69□□□□□ -0.38
GPC4-201ENST00000370828 PGM5Q15124 567 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 CHST15Q7LFX5 561 aaPredicted RBP12.69□□□□□ -0.38
GPC4-201ENST00000370828 CYP2U1Q7Z449 544 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 PIK3C3Q8NEB9 887 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 HNRNPABQ99729 332 aaKnown RBP12.69□□□□□ -0.38
GPC4-201ENST00000370828 DDX43Q9NXZ2 648 aaKnown RBP12.69□□□□□ -0.38
GPC4-201ENST00000370828 NKIRAS2Q9NYR9 191 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 ZNF112Q9UJU3 913 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 MFHAS1Q9Y4C4 1052 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 BCLAF3A2AJT9 711 aaKnown RBP12.69□□□□□ -0.38
GPC4-201ENST00000370828 EFCAB9A8MZ26 197 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 RGL2O15211 777 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 UGT2B11O75310 529 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 DNAJB2P25686 324 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 GSTM5P46439 218 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 CLCN5P51795 746 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 PPP2R2DQ66LE6 453 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 ZC3H7AQ8IWR0 971 aaKnown RBP12.69□□□□□ -0.38
GPC4-201ENST00000370828 CYP4Z2PQ8N1L4 340 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 FBXL20Q96IG2 436 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 GDAP2Q9NXN4 497 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 ERAP1Q9NZ08 941 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 RGS17Q9UGC6 210 aaPredicted RBP12.69□□□□□ -0.38
GPC4-201ENST00000370828 PEX16Q9Y5Y5 336 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 ARHGEF33A8MVX0 844 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 C2orf74A8MZ97 194 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 SSX5O60225 188 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 WARSP23381 471 aaKnown RBP12.69□□□□□ -0.38
GPC4-201ENST00000370828 TNFSF9P41273 254 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 SYT16Q17RD7 645 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 CMPK2Q5EBM0 449 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 FSTL4Q6MZW2 842 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 ZCCHC8Q6NZY4 707 aaKnown RBP12.69□□□□□ -0.38
GPC4-201ENST00000370828 ZYG11AQ6WRX3 759 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 ANKS3Q6ZW76 656 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 GALNT12Q8IXK2 581 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 SLC34A3Q8N130 599 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 DPP10Q8N608 796 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 ZNF671Q8TAW3 534 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 FAM151AQ8WW52 585 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 NRG4Q8WWG1 115 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 ASB9Q96DX5 294 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 SLC4A9Q96Q91 983 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 XKR8Q9H6D3 395 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 CD320Q9NPF0 282 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 UCKL1Q9NWZ5 548 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 CMTM6Q9NX76 183 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 RPS6KA6Q9UK32 745 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 NUP50Q9UKX7 468 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 SNX7Q9UNH6 387 aa12.69□□□□□ -0.38
GPC4-201ENST00000370828 A8MV72 311 aaPredicted RBP12.68□□□□□ -0.38
GPC4-201ENST00000370828 TTC34A8MYJ7 566 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 ZW10O43264 779 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 LRIG2O94898 1065 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 CLK2P49760 499 aaKnown RBP12.68□□□□□ -0.38
GPC4-201ENST00000370828 ACLYP53396 1101 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 MXD1Q05195 221 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 GPR162Q16538 588 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 TMPRSS11AQ6ZMR5 421 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 LINC00116Q8NCU8 138 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 GATA6Q92908 595 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 MFSD3Q96ES6 412 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 FDXACB1Q9BRP7 624 aaPredicted RBP12.68□□□□□ -0.38
GPC4-201ENST00000370828 TYROBPO43914 113 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 RSL1D1O76021 490 aaKnown RBP12.68□□□□□ -0.38
GPC4-201ENST00000370828 SLURP2P0DP57 97 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 RIPPLY1Q0D2K3 151 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 GRIK5Q16478 980 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 MSS51Q4VC12 460 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 PYHIN1Q6K0P9 492 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 SYCE2Q6PIF2 218 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 SPERTQ8NA61 448 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 SMG8Q8ND04 991 aaKnown RBP12.68□□□□□ -0.38
GPC4-201ENST00000370828 ITM2CQ9NQX7 267 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 CHRAC1Q9NRG0 131 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 PDP1Q9P0J1 537 aaPredicted RBP12.68□□□□□ -0.38
GPC4-201ENST00000370828 MAP10Q9P2G4 905 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 TRPC4Q9UBN4 977 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 TIMM22Q9Y584 194 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 SF3B1O75533 1304 aaKnown RBP eCLIP12.68□□□□□ -0.38
GPC4-201ENST00000370828 CASZ1Q86V15 1759 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 IPO13O94829 963 aaKnown RBP12.68□□□□□ -0.38
GPC4-201ENST00000370828 NPPAP01160 153 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 ERBB2P04626 1255 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 IRF1P10914 325 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 HNF4AP41235 474 aa12.68□□□□□ -0.38
GPC4-201ENST00000370828 HARS2P49590 506 aaKnown RBP12.68□□□□□ -0.38
GPC4-201ENST00000370828 RENBPP51606 427 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms