RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 BMP7P18075 431 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 TACR2P21452 398 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 EPHA3P29320 983 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 NOMO3P69849 1222 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 DSC2Q02487 901 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CRHR2Q13324 411 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 INO80DQ53TQ3 878 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CMC1Q7Z7K0 106 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CADM2Q8N3J6 435 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 HDDC3Q8N4P3 179 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 DCBLD1Q8N8Z6 715 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 ENKURQ8TC29 256 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 BSNDQ8WZ55 320 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 C5orf34Q96MH7 638 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 RIPOR3Q96MK2 946 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CYP2S1Q96SQ9 504 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 SNX15Q9NRS6 342 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 XPR1Q9UBH6 696 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 GMEB2Q9UKD1 530 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 PPLO60437 1756 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 hCG_1818297A0A087WSY0 165 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 QSOX1O00391 747 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 TCEA3O75764 348 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CDK14O94921 469 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 MYBL2P10244 700 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 PTPN2P17706 415 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 ATP5F1P24539 256 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 PEX6Q13608 980 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 HPS6Q86YV9 775 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 KCT2Q8NC54 265 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 SETD9Q8NE22 299 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 DNASE1L2Q92874 299 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 DNAJC19Q96DA6 116 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 MRPL57Q9BQC6 102 aaKnown RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 SPATA5L1Q9BVQ7 753 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 SLC35C2Q9NQQ7 365 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CLN6Q9NWW5 311 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 PTGFRNQ9P2B2 879 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 TBC1D14Q9P2M4 693 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 EGFL7Q9UHF1 273 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 COLEC10Q9Y6Z7 277 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CDC42P60953 191 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 SQLEQ14534 574 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 ACAP2Q15057 778 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 RNASE12Q5GAN4 147 aaKnown RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 NT5DC1Q5TFE4 455 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 DHRSXQ8N5I4 330 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 EXOSC8Q96B26 276 aaKnown RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 HMCESQ96FZ2 354 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 PPP3R2Q96LZ3 170 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 TRNT1Q96Q11 434 aaKnown RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 SLC38A2Q96QD8 506 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 C9orf16Q9BUW7 83 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 ATG10Q9H0Y0 220 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 GDF3Q9NR23 364 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 ENOPH1Q9UHY7 261 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CLEC4AQ9UMR7 237 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 SH3GLB1Q9Y371 365 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 COL1A2P08123 1366 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 FAM155BO75949 473 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 PRKCGP05129 697 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 DHPSP49366 369 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 PGDP52209 483 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 DGKEP52429 567 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 TEAD4Q15561 434 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 UAP1L1Q3KQV9 507 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 ATXN7L2Q5T6C5 722 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 HIPK1Q86Z02 1210 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 OR7D4Q8NG98 312 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CD101Q93033 1021 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CRISPLD1Q9H336 500 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CPQQ9Y646 472 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 MGRN1O60291 552 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CLDN11O75508 207 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CCNE2O96020 404 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CST3P01034 146 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 GIMD1P0DJR0 217 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 ALADP13716 330 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 GNPDA1P46926 289 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 PTPN5P54829 565 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 UGT2B15P54855 530 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 MBTD1Q05BQ5 628 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 DLG2Q15700 870 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 PMF1Q6P1K2 205 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 ADAMTSL2Q86TH1 951 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 SPPL2BQ8TCT7 592 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 MPP4Q96JB8 637 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 GTF2IRD1Q9UHL9 959 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 TMCO1Q9UM00 188 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 PCDHGC4Q9Y5F7 938 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 A0A1W2PQ67 120 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 H3BNH8 94 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 MFSD11O43934 449 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 DUSP11O75319 330 aaKnown RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 LGR5O75473 907 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 RBMXL2O75526 392 aaKnown RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CST1P01037 141 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 ITGAVP06756 1048 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 H2AFXP16104 143 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 IDSP22304 550 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms