RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 MMP14P50281 582 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 BNC1Q01954 994 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 PTSQ03393 145 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 GPR158Q5T848 1215 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 EMC10Q5UCC4 262 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 IKBIPQ70UQ0 350 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 MLPHQ9BV36 600 aaPredicted RBP15.92■□□□□ 0.14
COL17A1-202ENST00000369733 PCDHAC1Q9H158 963 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 C1orf21Q9H246 121 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 ING4Q9UNL4 249 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 SAMD4AQ9UPU9 718 aaKnown RBP15.92■□□□□ 0.14
COL17A1-202ENST00000369733 COQ4Q9Y3A0 265 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 MRC1P22897 1456 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 FAM208AQ9UK61 1670 aaKnown RBP15.92■□□□□ 0.14
COL17A1-202ENST00000369733 SLC15A5A6NIM6 579 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 ABCC6O95255 1503 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 OLR1P78380 273 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 MFSD10Q14728 455 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 FAM117BQ6P1L5 589 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 C16orf59Q7L2K0 433 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 PLPPR4Q7Z2D5 763 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 GAD1Q99259 594 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 ASB8Q9H765 288 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 RPS6KB2Q9UBS0 482 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 ZNHIT2Q9UHR6 403 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 PDE10AQ9Y233 779 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 LRATO95237 230 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 NCK1P16333 377 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 ADRA1BP35368 520 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 MFSD4BQ5TF39 518 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 ERLEC1Q96DZ1 483 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 ING3Q9NXR8 418 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 UXTQ9UBK9 157 aaPredicted RBP15.91■□□□□ 0.14
COL17A1-202ENST00000369733 C3P01024 1663 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 NPEPPSL1A6NEC2 478 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 KLF11O14901 512 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 AREL1O15033 823 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 LRG1P02750 347 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 ASLP04424 464 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 CHRNGP07510 517 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 FCHO2Q0JRZ9 810 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 SFT2D3Q587I9 215 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 FSTL5Q8N475 847 aaPredicted RBP15.91■□□□□ 0.14
COL17A1-202ENST00000369733 LRRC17Q8N6Y2 441 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 MRPS31Q92665 395 aaKnown RBP15.91■□□□□ 0.14
COL17A1-202ENST00000369733 ABCG8Q9H221 673 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.91■□□□□ 0.14
COL17A1-202ENST00000369733 TIMM22Q9Y584 194 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 NPHS1O60500 1241 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 SERPINA1P01009 418 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 PRKAR1AP10644 381 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 XRCC1P18887 633 aaPredicted RBP15.91■□□□□ 0.14
COL17A1-202ENST00000369733 IL23RQ5VWK5 629 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 TRMT11Q7Z4G4 463 aaKnown RBP15.91■□□□□ 0.14
COL17A1-202ENST00000369733 LRRC52Q8N7C0 313 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 AP3S1Q92572 193 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 AGAP2Q99490 1192 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 SUV39H1O43463 412 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 STX11O75558 287 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 METTL18O95568 372 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 SLC7A1P30825 629 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 FAM131AQ6UXB0 335 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 CCDC185Q8N715 623 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 KLHL31Q9H511 634 aa15.91■□□□□ 0.14
COL17A1-202ENST00000369733 ZNF395Q9H8N7 513 aaPredicted RBP15.91■□□□□ 0.14
COL17A1-202ENST00000369733 PDP1Q9P0J1 537 aaPredicted RBP15.91■□□□□ 0.14
COL17A1-202ENST00000369733 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL17A1-202ENST00000369733 TPD52L2O43399 206 aaKnown RBP15.9■□□□□ 0.14
COL17A1-202ENST00000369733 FTH1P02794 183 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 PTPRAP18433 802 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 CAPZA2P47755 286 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 CDK18Q07002 472 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 PPM1LQ5SGD2 360 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 ATAD3BQ5T9A4 648 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 DDI2Q5TDH0 399 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 SLC9A4Q6AI14 798 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 OGFOD2Q6N063 350 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 ZNF671Q8TAW3 534 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.9■□□□□ 0.14
COL17A1-202ENST00000369733 C2CD4BA6NLJ0 364 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 CXorf49A8MYA2 514 aaPredicted RBP15.9■□□□□ 0.14
COL17A1-202ENST00000369733 PMM2O15305 246 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 AMHP03971 560 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 NMBRP28336 390 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 CPSF6Q16630 551 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL17A1-202ENST00000369733 TYSND1Q2T9J0 566 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 CATSPERGQ6ZRH7 1159 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 NARS2Q96I59 477 aaKnown RBP15.9■□□□□ 0.14
COL17A1-202ENST00000369733 ARHGEF4Q9NR80 690 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 MAPRE3Q9UPY8 281 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 AOC1P19801 751 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 MERTKQ12866 999 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 TRIM32Q13049 653 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 PMF1Q6P1K2 205 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 PTCHD4Q6ZW05 846 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 RAB43Q86YS6 212 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 YAF2Q8IY57 180 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 NIPA2Q8N8Q9 360 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 PCDH19Q8TAB3 1148 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 ANGPT4Q9Y264 503 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms