RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 UGT1A10Q9HAW8 530 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 UGT1A8Q9HAW9 530 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 RGPD3A6NKT7 1758 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 RGPD4Q7Z3J3 1758 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 GREB1LQ9C091 1923 aaPredicted RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 GLYATL1P3A0A0U1RQE8 302 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 CCDC154A6NI56 674 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 MEI4A8MW99 385 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 PRR5-ARHGAP8B1AHC4 643 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM72CH0Y354 149 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC22A2O15244 555 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 PRAMEF11O60813 436 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 GOT2P00505 430 aaKnown RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SPATA31D3P0C874 917 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 IDO1P14902 403 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 EPHA3P29320 983 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SPAM1P38567 509 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 GPR15P49685 360 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 RPS24P62847 133 aaKnown RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 ARHGAP8P85298 464 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 CHRNB3Q05901 458 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 BTKQ06187 659 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 DDX39BQ13838 428 aaKnown RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SPRED3Q2MJR0 410 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 ARL13AQ5H913 290 aaPredicted RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM26DQ5JW98 314 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM72AQ5TYM5 149 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 STEAP4Q687X5 459 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM72DQ6L9T8 149 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 RNF19BQ6ZMZ0 732 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SPATA31D4Q6ZUB0 917 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 ADCK2Q7Z695 626 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 ZC3HC1Q86WB0 502 aaKnown RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM72BQ86X60 149 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 DHFR2Q86XF0 187 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 IGDCC3Q8IVU1 814 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 DENND6AQ8IWF6 608 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 FSTL5Q8N475 847 aaPredicted RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 GRIN3AQ8TCU5 1115 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 C10orf82Q8WW14 230 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 NMD3Q96D46 503 aaKnown RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 TMEM209Q96SK2 561 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 C1QTNF7Q9BXJ2 289 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 ARL8BQ9NVJ2 186 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 MOCS1Q9NZB8 636 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 KIF17Q9P2E2 1029 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 MSRAQ9UJ68 235 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SNX6Q9UNH7 406 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 MFHAS1Q9Y4C4 1052 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 PCDHGC4Q9Y5F7 938 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SNX5Q9Y5X3 404 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 TBC1D3BA6NDS4 549 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF839A8K0R7 811 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 HNRNPRO43390 633 aaKnown RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 HNRNPLP14866 589 aaKnown RBP eCLIP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 ATP6V1B1P15313 513 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 PIK3R1P27986 724 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 CHRNA4P43681 627 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 ATXN3P54252 364 aaPredicted RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 NME5P56597 212 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 MCCD1P59942 119 aaPredicted RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 CYTH1Q15438 398 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 RAB41Q5JT25 222 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 CES5AQ6NT32 575 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 AAGABQ6PD74 315 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 IL27RAQ6UWB1 636 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM151BQ6UXP7 276 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SZRD1Q7Z422 152 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM126BQ8IXS8 530 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 TCAIMQ8N3R3 496 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 KLHDC9Q8NEP7 349 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF555Q8NEP9 628 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SNRNP27Q8WVK2 155 aaKnown RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 C11orf84Q9BUA3 381 aaPredicted RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 GPR62Q9BZJ7 368 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 KCTD5Q9NXV2 234 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 AHSPQ9NZD4 102 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 EVLQ9UI08 416 aaPredicted RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 BLOC1S6Q9UL45 172 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 MTF2Q9Y483 593 aaPredicted RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SMCHD1A6NHR9 2005 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 EVPLQ92817 2033 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 LTBP1Q14766 1721 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 DYTNA2CJ06 578 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 MGAT4DA6NG13 374 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 C16orf96A6NNT2 1141 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 BBIP1A8MTZ0 92 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 C5orf58C9J3I9 102 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 NEDD8-MDP1E9PL57 170 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 J3KR12 359 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 GSC2O15499 205 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 KDELR3O43731 214 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SIN3BO75182 1162 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SEC22BO75396 215 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SMNDC1O75940 238 aaKnown RBP eCLIP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 NFATC1O95644 943 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 MPSTP25325 297 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 EEF1DP29692 281 aaKnown RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 GSTT1P30711 240 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms