RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CHRM1P11229 460 aaPredicted RBP23.86■■□□□ 1.41
SNX3-203ENST00000368979 MC4RP32245 332 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 SERPINB8P50452 374 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 XIAPP98170 497 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 TYSND1Q2T9J0 566 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 ZNF789Q5FWF6 425 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 RALGPS2Q86X27 583 aaPredicted RBP23.86■■□□□ 1.41
SNX3-203ENST00000368979 DENND1AQ8TEH3 1009 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 FAM129BQ96TA1 746 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 ZDHHC4Q9NPG8 344 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 B4GALT6Q9UBX8 382 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 SARDHQ9UL12 918 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 PPM1HQ9ULR3 514 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 NPC1O15118 1278 aa23.85■■□□□ 1.41
SNX3-203ENST00000368979 TIMP2P16035 220 aa23.85■■□□□ 1.41
SNX3-203ENST00000368979 KIR2DL1P43626 348 aaPredicted RBP23.85■■□□□ 1.41
SNX3-203ENST00000368979 CSRP3P50461 194 aa23.85■■□□□ 1.41
SNX3-203ENST00000368979 NEK3P51956 506 aa23.85■■□□□ 1.41
SNX3-203ENST00000368979 E2F5Q15329 346 aa23.85■■□□□ 1.41
SNX3-203ENST00000368979 FASTKD1Q53R41 847 aaKnown RBP23.85■■□□□ 1.41
SNX3-203ENST00000368979 LRRC66Q68CR7 880 aa23.85■■□□□ 1.41
SNX3-203ENST00000368979 LDB1Q86U70 411 aaPredicted RBP23.85■■□□□ 1.41
SNX3-203ENST00000368979 ANKRD42Q8N9B4 389 aa23.85■■□□□ 1.41
SNX3-203ENST00000368979 ACVR1CQ8NER5 493 aa23.85■■□□□ 1.41
SNX3-203ENST00000368979 ATXN2LQ8WWM7 1075 aaKnown RBP23.85■■□□□ 1.41
SNX3-203ENST00000368979 CENPTQ96BT3 561 aa23.85■■□□□ 1.41
SNX3-203ENST00000368979 C8orf33Q9H7E9 229 aaPredicted RBP23.85■■□□□ 1.41
SNX3-203ENST00000368979 SNX15Q9NRS6 342 aa23.85■■□□□ 1.41
SNX3-203ENST00000368979 INTS9Q9NV88 658 aaKnown RBP23.85■■□□□ 1.41
SNX3-203ENST00000368979 STON1Q9Y6Q2 735 aa23.85■■□□□ 1.41
SNX3-203ENST00000368979 PIAS3Q9Y6X2 628 aa23.85■■□□□ 1.41
SNX3-203ENST00000368979 C16orf96A6NNT2 1141 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 SHOX2O60902 331 aaPredicted RBP23.84■■□□□ 1.41
SNX3-203ENST00000368979 EPHX1P07099 455 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 CYP2A6P11509 494 aaPredicted RBP23.84■■□□□ 1.41
SNX3-203ENST00000368979 RPA3P35244 121 aaPredicted RBP23.84■■□□□ 1.41
SNX3-203ENST00000368979 POLD2P49005 469 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 STC1P52823 247 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 LRRC73Q5JTD7 316 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 CNSTQ6PJW8 725 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 PARS2Q7L3T8 475 aaKnown RBP23.84■■□□□ 1.41
SNX3-203ENST00000368979 CBARPQ8N350 705 aaPredicted RBP23.84■■□□□ 1.41
SNX3-203ENST00000368979 ZNF513Q8N8E2 541 aaPredicted RBP23.84■■□□□ 1.41
SNX3-203ENST00000368979 PIP4K2CQ8TBX8 421 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 PRSS16Q9NQE7 514 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 HEBP1Q9NRV9 189 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 PCMTD2Q9NV79 361 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 NKIRAS1Q9NYS0 192 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 FAM95CA0A1B0GW59 222 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 A6NNZ2 444 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 A8MX80 341 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 ZWINTO95229 277 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 ASGR2P07307 311 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 PRSS56P0CW18 603 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 ITGB7P26010 798 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 VIPR1P32241 457 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 CLCN5P51795 746 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 SEMG2Q02383 582 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 ILF2Q12905 390 aaKnown RBP23.84■■□□□ 1.41
SNX3-203ENST00000368979 TUBB8Q3ZCM7 444 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 TTC19Q6DKK2 380 aaPredicted RBP23.84■■□□□ 1.41
SNX3-203ENST00000368979 CMC1Q7Z7K0 106 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 SDCCAG8Q86SQ7 713 aaPredicted RBP23.84■■□□□ 1.41
SNX3-203ENST00000368979 DEFB123Q8N688 67 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 PNPLA1Q8N8W4 532 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 CAB39LQ9H9S4 337 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 PCDH12Q9NPG4 1184 aa23.84■■□□□ 1.41
SNX3-203ENST00000368979 KPNA3O00505 521 aaPredicted RBP23.83■■□□□ 1.41
SNX3-203ENST00000368979 GAPDHSO14556 408 aaPredicted RBP23.83■■□□□ 1.41
SNX3-203ENST00000368979 COPEO14579 308 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 TM9SF1O15321 606 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 C1SP09871 688 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 ZNF30P17039 623 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 BPIP17213 487 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 NFKBIAP25963 317 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 TYK2P29597 1187 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 GNGT1P63211 74 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 PTSQ03393 145 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 PDE1CQ14123 709 aaPredicted RBP23.83■■□□□ 1.41
SNX3-203ENST00000368979 PSAPL1Q6NUJ1 521 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 CDHR3Q6ZTQ4 885 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 MGARPQ8TDB4 240 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 TCP10LQ8TDR4 215 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 ARRDC3Q96B67 414 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 INTS10Q9NVR2 710 aaKnown RBP23.83■■□□□ 1.41
SNX3-203ENST00000368979 PSD3Q9NYI0 1048 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 SLC39A10Q9ULF5 831 aa23.83■■□□□ 1.41
SNX3-203ENST00000368979 SPTBN5Q9NRC6 3674 aaKnown RBP23.82■■□□□ 1.4
SNX3-203ENST00000368979 METAP1P53582 386 aa23.82■■□□□ 1.4
SNX3-203ENST00000368979 PTPN5P54829 565 aa23.82■■□□□ 1.4
SNX3-203ENST00000368979 PON2Q15165 354 aa23.82■■□□□ 1.4
SNX3-203ENST00000368979 POM121L1PQ3SYA9 428 aa23.82■■□□□ 1.4
SNX3-203ENST00000368979 TMEM196Q5HYL7 178 aa23.82■■□□□ 1.4
SNX3-203ENST00000368979 DPPA4Q7L190 304 aa23.82■■□□□ 1.4
SNX3-203ENST00000368979 DSG4Q86SJ6 1040 aa23.82■■□□□ 1.4
SNX3-203ENST00000368979 CHPFQ8IZ52 775 aa23.82■■□□□ 1.4
SNX3-203ENST00000368979 PBXIP1Q96AQ6 731 aa23.82■■□□□ 1.4
SNX3-203ENST00000368979 TCF12Q99081 682 aa23.82■■□□□ 1.4
SNX3-203ENST00000368979 APPL1Q9UKG1 709 aa23.82■■□□□ 1.4
SNX3-203ENST00000368979 MPOP05164 745 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms