RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 GSSP48637 474 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 IRF8Q02556 426 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 ZC3H3Q8IXZ2 948 aaKnown RBP13.27□□□□□ -0.28
PTPRK-204ENST00000368210 GRIN3AQ8TCU5 1115 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 SELENOMQ8WWX9 145 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 MFSD3Q96ES6 412 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 SLC9A7Q96T83 725 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 UGT2B28Q9BY64 529 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 ASAH2Q9NR71 780 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 THG1LQ9NWX6 298 aaKnown RBP13.27□□□□□ -0.28
PTPRK-204ENST00000368210 TRAFD1O14545 582 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-204ENST00000368210 LINGO3P0C6S8 592 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 HGFP14210 728 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 POU1F1P28069 291 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 CDH13P55290 713 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 PHC1P78364 1004 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 SETMARQ53H47 684 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-204ENST00000368210 ANKS1BQ7Z6G8 1248 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 GNB5O14775 395 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 AXIN1O15169 862 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 PEX1O43933 1283 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 RAB25P57735 213 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 ABATP80404 500 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 SOWAHAQ2M3V2 549 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 IKBIPQ70UQ0 350 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 DSG4Q86SJ6 1040 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 ADAMTSL2Q86TH1 951 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 TAC4Q86UU9 113 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 IQCF2Q8IXL9 164 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 SPPL2AQ8TCT8 520 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 SLCO2A1Q92959 643 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 DNAJC1Q96KC8 554 aaKnown RBP13.27□□□□□ -0.29
PTPRK-204ENST00000368210 CORO1BQ9BR76 489 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 SEMA6AQ9H2E6 1030 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 DENND2DQ9H6A0 471 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-204ENST00000368210 ARL8BQ9NVJ2 186 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 DTLQ9NZJ0 730 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 TMEM59LQ9UK28 342 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 CDV3Q9UKY7 258 aaKnown RBP13.27□□□□□ -0.29
PTPRK-204ENST00000368210 SPACA6W5XKT8 324 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 GRIN2DO15399 1336 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 E9PAM4 449 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 ALDH1A2O94788 518 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 RHOQP17081 205 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 FBXL19Q6PCT2 694 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 NECAB2Q7Z6G3 386 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 FITM2Q8N6M3 262 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 CDYL2Q8N8U2 506 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 CMASQ8NFW8 434 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-204ENST00000368210 ITFG1Q8TB96 612 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 RCN3Q96D15 328 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 SSU72Q9NP77 194 aaKnown RBP13.27□□□□□ -0.29
PTPRK-204ENST00000368210 RAB26Q9ULW5 256 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 BAIAP2Q9UQB8 552 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 CHKBQ9Y259 395 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 TPRKBQ9Y3C4 175 aa13.27□□□□□ -0.29
PTPRK-204ENST00000368210 HTR7P34969 479 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 ALDH9A1P49189 494 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 ATXN1P54253 815 aaKnown RBP13.26□□□□□ -0.29
PTPRK-204ENST00000368210 COPZ1P61923 177 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 NRF1Q16656 503 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 CA9Q16790 459 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 EML3Q32P44 896 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 ABRAXAS1Q6UWZ7 409 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 ULK2Q8IYT8 1036 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 CLYBLQ8N0X4 340 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 TMEM132CQ8N3T6 1108 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 TWNKQ96RR1 684 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 TRMOQ9BU70 441 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 ING4Q9UNL4 249 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 YJEFN3A6XGL0 299 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 CCRL2O00421 344 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 GSC2O15499 205 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 CLDN11O75508 207 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 YBEYP58557 167 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-204ENST00000368210 TRAPPC5Q8IUR0 188 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 EID3Q8N140 333 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 C7orf26Q96N11 449 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 SPRTNQ9H040 489 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-204ENST00000368210 SPAG4Q9NPE6 437 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 USE1Q9NZ43 259 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 ADAM30Q9UKF2 790 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 AZIN1O14977 448 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 TMEM63AO94886 807 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 COL6A2P12110 1019 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 IL1R2P27930 398 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 PARP15Q460N3 678 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 PPM1JQ5JR12 505 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 METTL3Q86U44 580 aaKnown RBP13.26□□□□□ -0.29
PTPRK-204ENST00000368210 ERI1Q8IV48 349 aaKnown RBP13.26□□□□□ -0.29
PTPRK-204ENST00000368210 CLEC4CQ8WTT0 213 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 TBCDQ9BTW9 1192 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 ING3Q9NXR8 418 aa13.26□□□□□ -0.29
PTPRK-204ENST00000368210 MTF2Q9Y483 593 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-204ENST00000368210 SLC9A3R1O14745 358 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-204ENST00000368210 SEPT4O43236 478 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 SH3BGRLO75368 114 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 ULK1O75385 1050 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 PIK3R1P27986 724 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 GPR15P49685 360 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms