RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 PPM1LQ5SGD2 360 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 ZBTB46Q86UZ6 589 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 NAT14Q8WUY8 206 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 RERGLQ9H628 205 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 ADPRHL2Q9NX46 363 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 H2AFY2Q9P0M6 372 aaPredicted RBP11.68□□□□□ -0.54
COPA-202ENST00000368069 NENFQ9UMX5 172 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 DUSP12Q9UNI6 340 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 SOX6P35712 828 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 ZNF252P-AS1Q0IIN9 211 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 ADGRE1Q14246 886 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 TRIM25Q14258 630 aaKnown RBP11.68□□□□□ -0.54
COPA-202ENST00000368069 ZNF618Q5T7W0 954 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 ACBD5Q5T8D3 534 aaPredicted RBP11.68□□□□□ -0.54
COPA-202ENST00000368069 KIAA0930Q6ICG6 404 aaPredicted RBP11.68□□□□□ -0.54
COPA-202ENST00000368069 FAM151BQ6UXP7 276 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 ARHGAP36Q6ZRI8 547 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 AADATQ8N5Z0 425 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 NLGN2Q8NFZ4 835 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 SCAMP5Q8TAC9 235 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 DENND1AQ8TEH3 1009 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 DNAJC1Q96KC8 554 aaKnown RBP11.68□□□□□ -0.54
COPA-202ENST00000368069 YME1L1Q96TA2 773 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 GPR21Q99679 349 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 GIMAP4Q9NUV9 329 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 ZMYND8Q9ULU4 1186 aaPredicted RBP11.68□□□□□ -0.54
COPA-202ENST00000368069 PADI4Q9UM07 663 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 FADS3Q9Y5Q0 445 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 SNX8Q9Y5X2 465 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 NT5C1B-RDH14C9J2C7 533 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 RFPL1O75677 317 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 NDST3O95803 873 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 CST1P01037 141 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 ANXA6P08133 673 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 PKMP14618 531 aaKnown RBP11.68□□□□□ -0.54
COPA-202ENST00000368069 MBLAC2Q68D91 279 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 USP45Q70EL2 814 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 DET1Q7L5Y6 550 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 CIR1Q86X95 450 aaPredicted RBP11.68□□□□□ -0.54
COPA-202ENST00000368069 DCBLD1Q8N8Z6 715 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 ZDHHC6Q9H6R6 413 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 REEP1Q9H902 201 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 USE1Q9NZ43 259 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 PSAT1Q9Y617 370 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 LINC00854A0A1B0GVQ3 168 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 ADCY6O43306 1168 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 CPSF6Q16630 551 aaKnown RBP eCLIP11.68□□□□□ -0.54
COPA-202ENST00000368069 FRMD7Q6ZUT3 714 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 SPATA19Q7Z5L4 167 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 CAMKK2Q96RR4 588 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 USP29Q9HBJ7 922 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 DNAJB4Q9UDY4 337 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 SNX6Q9UNH7 406 aa11.68□□□□□ -0.54
COPA-202ENST00000368069 OR6C75A6NL08 312 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 FZD9O00144 591 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 ONECUT3O60422 494 aaPredicted RBP11.67□□□□□ -0.54
COPA-202ENST00000368069 AOC1P19801 751 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 DUSP4Q13115 394 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 PITRM1Q5JRX3 1037 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 CDHR3Q6ZTQ4 885 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 TRMT11Q7Z4G4 463 aaKnown RBP11.67□□□□□ -0.54
COPA-202ENST00000368069 SATL1Q86VE3 508 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 CROCCP3Q8IVE0 287 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 TBC1D21Q8IYX1 336 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 PHTF2Q8N3S3 785 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 PSMG2Q969U7 264 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 PPM1MQ96MI6 270 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 FCRL5Q96RD9 977 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 C3orf18Q9UK00 162 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 UBXN8O00124 270 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 GOT2P00505 430 aaKnown RBP11.67□□□□□ -0.54
COPA-202ENST00000368069 ALDH9A1P49189 494 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 THOP1P52888 689 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 HNRNPDQ14103 355 aaKnown RBP11.67□□□□□ -0.54
COPA-202ENST00000368069 PCLAFQ15004 111 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 TIGD5Q53EQ6 642 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 TIFABQ6ZNK6 161 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 TUBGCP5Q96RT8 1024 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 SIRPGQ9P1W8 387 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 CNTN3Q9P232 1028 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 SLC28A1O00337 649 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 NTRK1P04629 796 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 SMAD3P84022 425 aaKnown RBP11.67□□□□□ -0.54
COPA-202ENST00000368069 CLCQ05315 142 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 OSTM1Q86WC4 334 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 TREML1Q86YW5 311 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 OR6K2Q8NGY2 324 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 STYXQ8WUJ0 223 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 C6orf62Q9GZU0 229 aaPredicted RBP11.67□□□□□ -0.54
COPA-202ENST00000368069 MAGEL2Q9UJ55 1249 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 PLCH1Q4KWH8 1693 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 USP54Q70EL1 1684 aa11.67□□□□□ -0.54
COPA-202ENST00000368069 PRR23AA6NEV1 266 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 KPNA4O00629 521 aaPredicted RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 MT-ND1P03886 318 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 TACR2P21452 398 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 GPR15P49685 360 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 POLR2JP52435 117 aaKnown RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 ALDH6A1Q02252 535 aaKnown RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 LCP2Q13094 533 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms