RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 KDELC2Q7Z4H8 507 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 HSD11B1LQ7Z5J1 315 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 TSPAN33Q86UF1 283 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 SDR16C5Q8N3Y7 309 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 LPCAT1Q8NF37 534 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 OR4C6Q8NH72 309 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 SPATA22Q8NHS9 363 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 LMX1AQ8TE12 382 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 TSACCQ96A04 125 aaPredicted RBP9.85□□□□□ -0.83
CD48-202ENST00000368046 FUBP1Q96AE4 644 aaKnown RBP9.85□□□□□ -0.83
CD48-202ENST00000368046 HAUS1Q96CS2 278 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 NUS1Q96E22 293 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 DTD2Q96FN9 168 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 HES6Q96HZ4 224 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 WDR92Q96MX6 357 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 SMIM14Q96QK8 99 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 FCRL5Q96RD9 977 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 TRIB3Q96RU7 358 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 FERMT1Q9BQL6 677 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 HERPUD2Q9BSE4 406 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 SCNM1Q9BWG6 230 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 SLC13A1Q9BZW2 595 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 GRPEL1Q9HAV7 217 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 NLGN3Q9NZ94 848 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 SPASTQ9UBP0 616 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 PNMA8BQ9ULN7 279 aaPredicted RBP9.85□□□□□ -0.83
CD48-202ENST00000368046 PCDHGA1Q9Y5H4 931 aa9.85□□□□□ -0.83
CD48-202ENST00000368046 A0A0U1RQS6 177 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 RGSL1A5PLK6 1076 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 GOLGA6L9A6NEM1 432 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 GOLGA6L3A6NEY3 463 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 TMEM202A6NGA9 273 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 CAPN8A6NHC0 703 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 H7C0C1 242 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 K7ESM1 405 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 DDX3YO15523 660 aaKnown RBP9.84□□□□□ -0.83
CD48-202ENST00000368046 HYAL3O43820 417 aaPredicted RBP9.84□□□□□ -0.83
CD48-202ENST00000368046 NRDCO43847 1150 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 GCATO75600 419 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 RASGRP1O95267 797 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 FTCDO95954 541 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 MT-CYBP00156 380 aaPredicted RBP9.84□□□□□ -0.83
CD48-202ENST00000368046 EPOP01588 193 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 CCDC175P0C221 793 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 RBP3P10745 1247 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 CTSEP14091 401 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 ACP1P24666 158 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 TEAD1P28347 426 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 RBL1P28749 1068 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 ATP5OP48047 213 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 DUSP3P51452 185 aaPredicted RBP9.84□□□□□ -0.83
CD48-202ENST00000368046 KIAA1024LP59773 190 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 SRP54P61011 504 aaKnown RBP9.84□□□□□ -0.83
CD48-202ENST00000368046 OTUD4Q01804 1114 aaKnown RBP9.84□□□□□ -0.83
CD48-202ENST00000368046 DNAJC3Q13217 504 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 ILKQ13418 452 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 ELOCQ15369 112 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 LRRC66Q68CR7 880 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 AADACL2Q6P093 401 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 ZNF765Q7L2R6 523 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 HID1Q8IV36 788 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 PHACTR4Q8IZ21 702 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 NRSN1Q8IZ57 195 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 ZNF567Q8N184 647 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 FAM181AQ8N9Y4 354 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 TTC13Q8NBP0 860 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 ZNF548Q8NEK5 533 aaPredicted RBP9.84□□□□□ -0.83
CD48-202ENST00000368046 OR56A4Q8NGH8 313 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 ACTL9Q8TC94 416 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 CCHCR1Q8TD31 782 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 QKIQ96PU8 341 aaKnown RBP eCLIP9.84□□□□□ -0.83
CD48-202ENST00000368046 SRPK1Q96SB4 655 aaKnown RBP9.84□□□□□ -0.83
CD48-202ENST00000368046 LGR4Q9BXB1 951 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 TEX101Q9BY14 249 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 ABCG8Q9H221 673 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 TCEAL2Q9H3H9 227 aaPredicted RBP9.84□□□□□ -0.83
CD48-202ENST00000368046 WDR26Q9H7D7 661 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 CAAP1Q9H8G2 361 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 MAGEE1Q9HCI5 957 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 APOBEC3BQ9UH17 382 aaKnown RBP9.84□□□□□ -0.83
CD48-202ENST00000368046 FAM153AQ9UHL3 310 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 PACSIN2Q9UNF0 486 aaPredicted RBP9.84□□□□□ -0.83
CD48-202ENST00000368046 MSRB2Q9Y3D2 182 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 NEUROG3Q9Y4Z2 214 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 KNL1Q8NG31 2342 aa9.84□□□□□ -0.83
CD48-202ENST00000368046 TRPM6Q9BX84 2022 aa9.83□□□□□ -0.84
CD48-202ENST00000368046 LOC285095A0A1B0GVY8 99 aa9.83□□□□□ -0.84
CD48-202ENST00000368046 LMO7DNF2Z398 122 aa9.83□□□□□ -0.84
CD48-202ENST00000368046 YY2O15391 372 aa9.83□□□□□ -0.84
CD48-202ENST00000368046 ZNF189O75820 626 aaPredicted RBP9.83□□□□□ -0.84
CD48-202ENST00000368046 PTMAP06454 111 aaKnown RBP9.83□□□□□ -0.84
CD48-202ENST00000368046 PYGLP06737 847 aa9.83□□□□□ -0.84
CD48-202ENST00000368046 ANXA6P08133 673 aa9.83□□□□□ -0.84
CD48-202ENST00000368046 CKMT1AP12532 417 aa9.83□□□□□ -0.84
CD48-202ENST00000368046 NFKB1P19838 968 aa9.83□□□□□ -0.84
CD48-202ENST00000368046 SPINK2P20155 84 aa9.83□□□□□ -0.84
CD48-202ENST00000368046 GPR1P46091 355 aa9.83□□□□□ -0.84
CD48-202ENST00000368046 STC1P52823 247 aa9.83□□□□□ -0.84
CD48-202ENST00000368046 EIF3EP60228 445 aaKnown RBP9.83□□□□□ -0.84
CD48-202ENST00000368046 C1orf61Q13536 156 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms