RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CYLC2Q14093 348 aaPredicted RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 GALNT3Q14435 633 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 MUM1Q2TAK8 710 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 ZNF789Q5FWF6 425 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 METTL3Q86U44 580 aaKnown RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 TCEAL8Q8IYN2 117 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 CDKN2AIPNLQ96HQ2 116 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 OR52B2Q96RD2 323 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 PBX4Q9BYU1 374 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 NUF2Q9BZD4 464 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 ZBP1Q9H171 429 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 MAN1C1Q9NR34 630 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 TAS2R13Q9NYV9 303 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 ASB3Q9Y575 518 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 OBSL1O75147 1896 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 GOLGA8CPA6NN73 597 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 NVLO15381 856 aaKnown RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 ZBTB14O43829 449 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 C1RP00736 705 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 KLKB1P03952 638 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 PYGLP06737 847 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 ZNF37AP17032 561 aaPredicted RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 RPL17P18621 184 aaKnown RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 LPOP22079 712 aaPredicted RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 PIK3R1P27986 724 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 TTPAP49638 278 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 CDKN2DP55273 166 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 ATP6V0D1P61421 351 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 PDAP1Q13442 181 aaKnown RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 CUL3Q13618 768 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 PGM2L1Q6PCE3 622 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 LRRC74BQ6ZQY2 392 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 ADGRG6Q86SQ4 1221 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 MYLK4Q86YV6 388 aaPredicted RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 PHTF2Q8N3S3 785 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 POU5F2Q8N7G0 328 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 FBXO27Q8NI29 283 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 SPPL3Q8TCT6 385 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 AGR3Q8TD06 166 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 NAF1Q96HR8 494 aaKnown RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 C17orf80Q9BSJ5 609 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 AARSD1Q9BTE6 412 aaKnown RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 TFB2MQ9H5Q4 396 aaKnown RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 ZNF385DQ9H6B1 395 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 MEAF6Q9HAF1 191 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 GTSE1Q9NYZ3 720 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 MARCH4Q9P2E8 410 aaPredicted RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 CDH22Q9UJ99 828 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 VPS28Q9UK41 221 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 ZNF510Q9Y2H8 683 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 YBX2Q9Y2T7 364 aaKnown RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 A0A1W2PPC1 479 aa14□□□□□ -0.17
USF1-202ENST00000368020 CBX4O00257 560 aa14□□□□□ -0.17
USF1-202ENST00000368020 LIN7AO14910 233 aaPredicted RBP14□□□□□ -0.17
USF1-202ENST00000368020 KRT36O76013 467 aa14□□□□□ -0.17
USF1-202ENST00000368020 MBL2P11226 248 aaPredicted RBP14□□□□□ -0.17
USF1-202ENST00000368020 ATP6V1C1P21283 382 aa14□□□□□ -0.17
USF1-202ENST00000368020 SP100P23497 879 aaPredicted RBP14□□□□□ -0.17
USF1-202ENST00000368020 EPHA3P29320 983 aa14□□□□□ -0.17
USF1-202ENST00000368020 INHBCP55103 352 aa14□□□□□ -0.17
USF1-202ENST00000368020 HERVK_113P63132 956 aa14□□□□□ -0.17
USF1-202ENST00000368020 SMAD3P84022 425 aaKnown RBP14□□□□□ -0.17
USF1-202ENST00000368020 SLC25A3Q00325 362 aa14□□□□□ -0.17
USF1-202ENST00000368020 MLLT1Q03111 559 aaPredicted RBP14□□□□□ -0.17
USF1-202ENST00000368020 TBL3Q12788 808 aaKnown RBP14□□□□□ -0.17
USF1-202ENST00000368020 RNF219Q5W0B1 726 aaPredicted RBP14□□□□□ -0.17
USF1-202ENST00000368020 NXNQ6DKJ4 435 aa14□□□□□ -0.17
USF1-202ENST00000368020 PDE12Q6L8Q7 609 aaKnown RBP14□□□□□ -0.17
USF1-202ENST00000368020 ISCA2Q86U28 154 aa14□□□□□ -0.17
USF1-202ENST00000368020 RNF135Q8IUD6 432 aa14□□□□□ -0.17
USF1-202ENST00000368020 FBXW8Q8N3Y1 598 aa14□□□□□ -0.17
USF1-202ENST00000368020 MAB21L3Q8N8X9 362 aa14□□□□□ -0.17
USF1-202ENST00000368020 KYQ8NBH2 561 aa14□□□□□ -0.17
USF1-202ENST00000368020 DNAJC9Q8WXX5 260 aa14□□□□□ -0.17
USF1-202ENST00000368020 PANX3Q96QZ0 392 aa14□□□□□ -0.17
USF1-202ENST00000368020 ERVK-6Q9BXR3 956 aa14□□□□□ -0.17
USF1-202ENST00000368020 VCX3BQ9H321 246 aa14□□□□□ -0.17
USF1-202ENST00000368020 ZBTB26Q9HCK0 441 aa14□□□□□ -0.17
USF1-202ENST00000368020 MRPL40Q9NQ50 206 aaKnown RBP14□□□□□ -0.17
USF1-202ENST00000368020 CXorf51AA0A1B0GTR3 108 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 TTC24A2A3L6 582 aaPredicted RBP13.99□□□□□ -0.17
USF1-202ENST00000368020 SYCE1LA8MT33 242 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 MEI4A8MW99 385 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 H0Y626 953 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 NEMP1O14524 444 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 NDUFS3O75489 264 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 ARHGEF15O94989 841 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 CD1DP15813 335 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 ITGAXP20702 1163 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 MAPK8P45983 427 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 SULT2A1Q06520 285 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 CYTH1Q15438 398 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 PDCD2Q16342 344 aaPredicted RBP13.99□□□□□ -0.17
USF1-202ENST00000368020 GPR158Q5T848 1215 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 CXorf57Q6NSI4 855 aaKnown RBP13.99□□□□□ -0.17
USF1-202ENST00000368020 CUZD1Q86UP6 607 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 DEFB107AQ8IZN7 70 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 STK40Q8N2I9 435 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 SPATA6LQ8N4H0 392 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 NKAPQ8N5F7 415 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms