RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 SCRN2Q96FV2 425 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 CDKN2AIPNLQ96HQ2 116 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 KLHL32Q96NJ5 620 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 RBBP8Q99708 897 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 STMN4Q9H169 189 aaPredicted RBP9.5□□□□□ -0.89
VTA1-201ENST00000367621 TRABDQ9H4I3 376 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 EVA1BQ9NVM1 165 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 POLR3BQ9NW08 1133 aaPredicted RBP9.5□□□□□ -0.89
VTA1-201ENST00000367621 HACD3Q9P035 362 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 IL17CQ9P0M4 197 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 ZFATQ9P243 1243 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 PPM1HQ9ULR3 514 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 PHTF1Q9UMS5 762 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 PLA2G4CQ9UP65 541 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 MTO1Q9Y2Z2 717 aaKnown RBP9.5□□□□□ -0.89
VTA1-201ENST00000367621 ZNF711Q9Y462 761 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 BRWD1Q9NSI6 2320 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 C5orf42Q9H799 3197 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 MYOFQ9NZM1 2061 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 UNC80Q8N2C7 3258 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 IQANK1A0A1B0GTG1 560 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 EDDM13A0A1B0GTR0 161 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 CAPN8A6NHC0 703 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 NPIPB15A6NHN6 443 aaPredicted RBP9.49□□□□□ -0.89
VTA1-201ENST00000367621 SPECC1L-ADORA2AF8WAN1 911 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 H7C0S8 307 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 SPINT1O43278 529 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 CRTAMO95727 393 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 GOT2P00505 430 aaKnown RBP9.49□□□□□ -0.89
VTA1-201ENST00000367621 MT-ND3P03897 115 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 ALDOAP04075 364 aaKnown RBP9.49□□□□□ -0.89
VTA1-201ENST00000367621 ITGA2BP08514 1039 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 PRSS56P0CW18 603 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 KRT15P19012 456 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 PAMP19021 973 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 LPOP22079 712 aaPredicted RBP9.49□□□□□ -0.89
VTA1-201ENST00000367621 LHCGRP22888 699 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 CTHP32929 405 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 CA5AP35218 305 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 HMGCLP35914 325 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 NNMTP40261 264 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 CCNFP41002 786 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 SLC1A2P43004 574 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 TNFRSF4P43489 277 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 KIR2DL1P43626 348 aaPredicted RBP9.49□□□□□ -0.89
VTA1-201ENST00000367621 ATP1A2P50993 1020 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 LIMK2P53671 638 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 CSE1LP55060 971 aaKnown RBP9.49□□□□□ -0.89
VTA1-201ENST00000367621 ST8SIA6P61647 398 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 TMPRSS15P98073 1019 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 MPP1Q00013 466 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 PPARDQ03181 441 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 CTBP1Q13363 440 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 PEX6Q13608 980 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 SEMA3AQ14563 771 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 GRM3Q14832 879 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 FNDC3BQ53EP0 1204 aaKnown RBP9.49□□□□□ -0.89
VTA1-201ENST00000367621 MROH9Q5TGP6 573 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 GALNT7Q86SF2 657 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 TSPAN33Q86UF1 283 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 ZC3HC1Q86WB0 502 aaKnown RBP9.49□□□□□ -0.89
VTA1-201ENST00000367621 C4orf33Q8N1A6 199 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 CBARPQ8N350 705 aaPredicted RBP9.49□□□□□ -0.89
VTA1-201ENST00000367621 BANPQ8N9N5 519 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 TMIEQ8NEW7 156 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 GRIN3AQ8TCU5 1115 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 HCAR2Q8TDS4 363 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 SGSM3Q96HU1 749 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 LRIG1Q96JA1 1093 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 KLF6Q99612 283 aaPredicted RBP9.49□□□□□ -0.89
VTA1-201ENST00000367621 P2RY13Q9BPV8 354 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 SSU72Q9NP77 194 aaKnown RBP9.49□□□□□ -0.89
VTA1-201ENST00000367621 ZDHHC4Q9NPG8 344 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 PRSS16Q9NQE7 514 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 DKK3Q9UBP4 350 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 IL36AQ9UHA7 158 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 ADAM21Q9UKJ8 722 aa9.49□□□□□ -0.89
VTA1-201ENST00000367621 TMEM120BA0PK00 339 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 C2orf81A6NN90 581 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 C16orf96A6NNT2 1141 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 PRPF4O43172 522 aaKnown RBP eCLIP9.48□□□□□ -0.89
VTA1-201ENST00000367621 NARSO43776 548 aaKnown RBP9.48□□□□□ -0.89
VTA1-201ENST00000367621 SPAG7O75391 227 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 KRT37O76014 449 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 KRT38O76015 456 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 HAUS5O94927 633 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 CLDN7O95471 211 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 APODP05090 189 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 ASGR2P07307 311 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 BRAFP15056 766 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 FOSL2P15408 326 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 KRT4P19013 534 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 CNTFP26441 200 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 VARSP26640 1264 aaKnown RBP9.48□□□□□ -0.89
VTA1-201ENST00000367621 ATP5DP30049 168 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 FOXN2P32314 431 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 RECQLP46063 649 aaPredicted RBP9.48□□□□□ -0.89
VTA1-201ENST00000367621 LEPRP48357 1165 aaKnown RBP9.48□□□□□ -0.89
VTA1-201ENST00000367621 NEK3P51956 506 aa9.48□□□□□ -0.89
VTA1-201ENST00000367621 SLC18A1P54219 525 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms