RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 HAT1O14929 419 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 LINC00032P0C843 101 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 NT5EP21589 574 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 TTKP33981 857 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 RAB25P57735 213 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 DLG4P78352 724 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 ILF3Q12906 894 aaKnown RBP eCLIP15.7■□□□□ 0.11e-8■■□□□ 14
NUCKS1-201ENST00000367142 PRKG2Q13237 762 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 HCAR2Q8TDS4 363 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 LMLNQ96KR4 655 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 JSRP1Q96MG2 331 aaPredicted RBP15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 POLMQ9NP87 494 aaPredicted RBP15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 PCDHB1Q9Y5F3 818 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 SMIM35A0A1B0GVV1 85 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 CCDC162PA2VCL2 907 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 RGSL1A5PLK6 1076 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 ZNF844Q08AG5 666 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 PARP15Q460N3 678 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 LIPMQ5VYY2 423 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 FAM192AQ9GZU8 254 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 L2HGDHQ9H9P8 463 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 GDF3Q9NR23 364 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 ZNF222Q9UK12 451 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 LRCH1Q9Y2L9 728 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 RAP2CQ9Y3L5 183 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 AK9Q5TCS8 1911 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 A0A1W2PQH9 124 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 TCF4P15884 667 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 VARSP26640 1264 aaKnown RBP15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 ABRAXAS1Q6UWZ7 409 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 PTCHD4Q6ZW05 846 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 C7orf61Q8IZ16 206 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 RASGEF1AQ8N9B8 481 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 PIK3C3Q8NEB9 887 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 PPTC7Q8NI37 304 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 DNASE1L2Q92874 299 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 BHLHE41Q9C0J9 482 aaPredicted RBP15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 MCUBQ9NWR8 336 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 CNTNAP1P78357 1384 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 MADDQ8WXG6 1647 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 C22orf31O95567 290 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 ADRB2P07550 413 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 CAPGP40121 348 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 STARP49675 285 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 SP2Q02086 613 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 ZNF398Q8TD17 642 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 BTN2A3PQ96KV6 586 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 CLDN5O00501 218 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 CYP4F2P78329 520 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 NRF1Q16656 503 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 UNC5BQ8IZJ1 945 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 ZBTB2Q8N680 514 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 RNF31Q96EP0 1072 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 MCRS1Q96EZ8 462 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 PRDM12Q9H4Q4 367 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 EQTNQ9NQ60 294 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 DUS2Q9NX74 493 aaKnown RBP15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 CDC42BPAQ5VT25 1732 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 TISP43B9A030 160 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 PGRMC2O15173 223 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 PSMD10O75832 226 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 TNFSF9P41273 254 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 TTC27Q6P3X3 843 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 STX12Q86Y82 276 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 EPS8L1Q8TE68 723 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 PIH1D2Q8WWB5 315 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 FCRL2Q96LA5 508 aaPredicted RBP15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 ABCG8Q9H221 673 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 POLR1AO95602 1720 aaPredicted RBP15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 TRBC1P01850 177 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 ITGAVP06756 1048 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 BRCC3P46736 316 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 FLT3LGP49771 235 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 NTRK3Q16288 839 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 ZCCHC12Q6PEW1 402 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 ARCQ7LC44 396 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 NET1Q7Z628 596 aaPredicted RBP15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 FAM81AQ8TBF8 368 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 FAR1Q8WVX9 515 aa15.69■□□□□ 0.1
NUCKS1-201ENST00000367142 PER2O15055 1255 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 GMFGO60234 142 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 SNAP91O60641 907 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 PAGE1O75459 146 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 IFNA6P05013 189 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 IFI35P80217 286 aaPredicted RBP15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 POTEHQ6S545 545 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 SCIMPQ6UWF3 145 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 OR6K2Q8NGY2 324 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 PGM2Q96G03 612 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 FAM163AQ96GL9 167 aaPredicted RBP15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 DNAJC11Q9NVH1 559 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 COPS7AQ9UBW8 275 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 LOC102724159A0A0B4J2E5 919 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 NPEPPSL1A6NEC2 478 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 SPATA31C2B4DYI2 1134 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 ITGA3P26006 1051 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 MNDAP41218 407 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 DUSP4Q13115 394 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 PWP2Q15269 919 aaKnown RBP15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 TMPRSS11BQ86T26 416 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms