RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 KRT12Q99456 494 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 MYOCQ99972 504 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 GORASP1Q9BQQ3 440 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 TRIM51Q9BSJ1 452 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 FRMD8P1Q9BZ68 369 aaPredicted RBP8.23□□□□□ -1.09
MRPL55-211ENST00000366738 TM6SF2Q9BZW4 377 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 TNKS2Q9H2K2 1166 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 KDM4CQ9H3R0 1056 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 FZD3Q9NPG1 666 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 WDR70Q9NW82 654 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 UCKL1Q9NWZ5 548 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 ANKMY1Q9P2S6 941 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 LHX3Q9UBR4 397 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 AMACRQ9UHK6 382 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 SLC25A13Q9UJS0 675 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 HPCAL4Q9UM19 191 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 ZFR2Q9UPR6 939 aaKnown RBP8.23□□□□□ -1.09
MRPL55-211ENST00000366738 SATB2Q9UPW6 733 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 ZNF148Q9UQR1 794 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 SSUH2Q9Y2M2 353 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 NEU2Q9Y3R4 380 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 TTLL3Q9Y4R7 772 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 ABCA12Q86UK0 2595 aa8.23□□□□□ -1.09
MRPL55-211ENST00000366738 COL27A1Q8IZC6 1860 aaPredicted RBP8.23□□□□□ -1.09
MRPL55-211ENST00000366738 A0A1W2PQU0 124 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 CCDC188H7C350 402 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 ALOX15BO15296 676 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 SLC31A1O15431 190 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 TTI1O43156 1089 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 SLC7A4O43246 635 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 RAD51CO43502 376 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 RNGTTO60942 597 aaKnown RBP8.22□□□□□ -1.09
MRPL55-211ENST00000366738 IFNB1P01574 187 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 JCHAINP01591 159 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 CCNB1P14635 433 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 CHRNA3P32297 505 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 NNMTP40261 264 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 PTGIRP43119 386 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 MMP13P45452 471 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 VPS41P49754 854 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 CLDN2P57739 230 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 SKOR1P84550 965 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 DSC2Q02487 901 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 SFSWAPQ12872 951 aaKnown RBP8.22□□□□□ -1.09
MRPL55-211ENST00000366738 TUBB2AQ13885 445 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 FGL2Q14314 439 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 ZNF235Q14590 738 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 IHHQ14623 411 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 ZNF284Q2VY69 593 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 FAXCQ5TGI0 409 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 SEL1L3Q68CR1 1132 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 RETSATQ6NUM9 610 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 CCDC81Q6ZN84 652 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 PRPF39Q86UA1 669 aaKnown RBP8.22□□□□□ -1.09
MRPL55-211ENST00000366738 LRRC49Q8IUZ0 686 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 TAB3Q8N5C8 712 aaPredicted RBP8.22□□□□□ -1.09
MRPL55-211ENST00000366738 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.22□□□□□ -1.09
MRPL55-211ENST00000366738 TEX26Q8N6G2 289 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 ATP11CQ8NB49 1132 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 OR13H1Q8NG92 308 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 OR6K2Q8NGY2 324 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 FATE1Q969F0 183 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 RTP4Q96DX8 246 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 ZNF599Q96NL3 588 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 AGAP3Q96P47 875 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 IL12RB2Q99665 862 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 MGME1Q9BQP7 344 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 TUBB2BQ9BVA1 445 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 CINPQ9BW66 212 aaPredicted RBP8.22□□□□□ -1.09
MRPL55-211ENST00000366738 NT5MQ9NPB1 228 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 RBM22Q9NW64 420 aaKnown RBP eCLIP8.22□□□□□ -1.098e-13■■■□□ 15.5
MRPL55-211ENST00000366738 KLHL8Q9P2G9 620 aaPredicted RBP8.22□□□□□ -1.09
MRPL55-211ENST00000366738 DMTF1Q9Y222 760 aa8.22□□□□□ -1.09
MRPL55-211ENST00000366738 LY6G6EA0A0G2JKS1 128 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 CTAGE15A4D2H0 777 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 CFAP69A5D8W1 941 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 ZSCAN5CA6NGD5 496 aaPredicted RBP8.21□□□□□ -1.1
MRPL55-211ENST00000366738 PRAMEF26H0Y7S4 382 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 KPNA3O00505 521 aaPredicted RBP8.21□□□□□ -1.1
MRPL55-211ENST00000366738 RAD51BO15315 384 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 INSIG1O15503 277 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 METTL18O95568 372 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 ECEL1O95672 775 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 MMP2P08253 660 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 CTAGE8P0CG41 777 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 THEGLP0DJG4 465 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 CKMT1AP12532 417 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 NFKB1P19838 968 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 CR2P20023 1033 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 DGKAP23743 735 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 PSMB4P28070 264 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 RBMS1P29558 406 aaKnown RBP8.21□□□□□ -1.1
MRPL55-211ENST00000366738 GKP32189 559 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 TERF1P54274 439 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 RHOAP61586 193 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 DR1Q01658 176 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 NIPAL4Q0D2K0 466 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 CLN3Q13286 438 aa8.21□□□□□ -1.1
MRPL55-211ENST00000366738 RFTN1Q14699 578 aaPredicted RBP8.21□□□□□ -1.1
MRPL55-211ENST00000366738 STAT4Q14765 748 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms