RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 TINF2Q9BSI4 451 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 TBC1D13Q9NVG8 400 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 NRCAMQ92823 1304 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 SOBPA7XYQ1 873 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 ANGPT2O15123 496 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 AQP9O43315 295 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 PGFP49763 221 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 POLD3Q15054 466 aaPredicted RBP19.65■□□□□ 0.74
TRIM58-201ENST00000366481 CNSTQ6PJW8 725 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 MFSD6LQ8IWD5 586 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 CAPSLQ8WWF8 208 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 SLX1AQ9BQ83 275 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 POLE4Q9NR33 117 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 MIOSQ9NXC5 875 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 SMPD3Q9NY59 655 aaPredicted RBP19.65■□□□□ 0.74
TRIM58-201ENST00000366481 MAN1A2O60476 641 aa19.64■□□□□ 0.74
TRIM58-201ENST00000366481 NCK1P16333 377 aa19.64■□□□□ 0.74
TRIM58-201ENST00000366481 DAOAP59103 153 aa19.64■□□□□ 0.74
TRIM58-201ENST00000366481 KCNJ8Q15842 424 aa19.64■□□□□ 0.74
TRIM58-201ENST00000366481 VPS26BQ4G0F5 336 aa19.64■□□□□ 0.74
TRIM58-201ENST00000366481 DCLRE1AQ6PJP8 1040 aa19.64■□□□□ 0.74
TRIM58-201ENST00000366481 CMTR2Q8IYT2 770 aaKnown RBP19.64■□□□□ 0.74
TRIM58-201ENST00000366481 FICDQ9BVA6 458 aa19.64■□□□□ 0.74
TRIM58-201ENST00000366481 EIF2B3Q9NR50 452 aaKnown RBP19.64■□□□□ 0.74
TRIM58-201ENST00000366481 TRIP12Q14669 1992 aaPredicted RBP19.64■□□□□ 0.73
TRIM58-201ENST00000366481 MYO1DO94832 1006 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 CAPGP40121 348 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 IMPG1Q17R60 797 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 C6orf10Q5SRN2 563 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 EPHX4Q8IUS5 362 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 RAVER1Q8IY67 606 aaKnown RBP19.64■□□□□ 0.73
TRIM58-201ENST00000366481 CLEC4FQ8N1N0 589 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 IL22Q9GZX6 179 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 CLDN25C9JDP6 229 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 CAPNS1P04632 268 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 STMN1P16949 149 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 S100A1P23297 94 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 TOP1MTQ969P6 601 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 CENPNQ96H22 339 aaPredicted RBP19.64■□□□□ 0.73
TRIM58-201ENST00000366481 CASS4Q9NQ75 786 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 MPP6Q9NZW5 540 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 PSME2Q9UL46 239 aa19.64■□□□□ 0.73
TRIM58-201ENST00000366481 ZNF487B1APH4 448 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 PTGES3LE9PB15 166 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 F8W810 466 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 TRIM24O15164 1050 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 SYNCRIPO60506 623 aaKnown RBP19.63■□□□□ 0.73
TRIM58-201ENST00000366481 OXTRP30559 389 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 RPS9P46781 194 aaKnown RBP19.63■□□□□ 0.73
TRIM58-201ENST00000366481 NSUN2Q08J23 767 aaKnown RBP eCLIP19.63■□□□□ 0.73
TRIM58-201ENST00000366481 ZNF789Q5FWF6 425 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 DNAJB14Q8TBM8 379 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 SPPL2BQ8TCT7 592 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 TMEM209Q96SK2 561 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 GBA3Q9H227 469 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 EHD1Q9H4M9 534 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 HMG20AQ9NP66 347 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 GDAP2Q9NXN4 497 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 POU2F3Q9UKI9 436 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 DERAQ9Y315 318 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 CPQQ9Y646 472 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.63■□□□□ 0.73
TRIM58-201ENST00000366481 SLC35E2BP0CK96 405 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 C1QTNF8P60827 252 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 PIGFQ07326 219 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 SLC36A3Q495N2 470 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 CRTC3Q6UUV7 619 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 FRA10AC1Q70Z53 315 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 TAC4Q86UU9 113 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 ZC3HC1Q86WB0 502 aaKnown RBP19.63■□□□□ 0.73
TRIM58-201ENST00000366481 KIAA2013Q8IYS2 634 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 SFRP1Q8N474 314 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 ZNF385DQ9H6B1 395 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 NOL6Q9H6R4 1146 aaKnown RBP19.63■□□□□ 0.73
TRIM58-201ENST00000366481 SIAEQ9HAT2 523 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 FBXW11Q9UKB1 542 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 PFDN6O15212 129 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 PGK1P00558 417 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 NKX2-5P52952 324 aaPredicted RBP19.63■□□□□ 0.73
TRIM58-201ENST00000366481 CCL14Q16627 93 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 CLEC14AQ86T13 490 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 CENPLQ8N0S6 344 aaPredicted RBP19.63■□□□□ 0.73
TRIM58-201ENST00000366481 CADM3Q8N126 398 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 ZCCHC7Q8N3Z6 543 aaKnown RBP19.63■□□□□ 0.73
TRIM58-201ENST00000366481 UPF1Q92900 1129 aaKnown RBP eCLIP19.63■□□□□ 0.73
TRIM58-201ENST00000366481 NT5C3BQ969T7 300 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 GTF2IRD1Q9UHL9 959 aa19.63■□□□□ 0.73
TRIM58-201ENST00000366481 FAM155AB1AL88 458 aaPredicted RBP19.62■□□□□ 0.73
TRIM58-201ENST00000366481 CHRM3P20309 590 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 TCEA1P23193 301 aaKnown RBP19.62■□□□□ 0.73
TRIM58-201ENST00000366481 ALDH4A1P30038 563 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 SCNN1GP51170 649 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 HK2P52789 917 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 MAXP61244 160 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 MFSD10Q14728 455 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 FAM117BQ6P1L5 589 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 TTC16Q8NEE8 873 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 RDH11Q8TC12 318 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 HDAC11Q96DB2 347 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 MUS81Q96NY9 551 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms