RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 MMP25Q9NPA2 562 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 POU2F3Q9UKI9 436 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 AMDHD2Q9Y303 409 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 AAR2Q9Y312 384 aaKnown RBP4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 UTYO14607 1347 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 PDS5AQ29RF7 1337 aaKnown RBP4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 A0A1W2PQM1 296 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 LRRC53A6NM62 1247 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 USP17L23D6RBM5 183 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 TNFSF14O43557 240 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 SOCS5O75159 536 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 ATP1A1P05023 1023 aaKnown RBP4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 HOXB5P09067 269 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 CDH1P12830 882 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 HLA-DOBP13765 273 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 ABCD3P28288 659 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 CDAP32320 146 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 ARL1P40616 181 aaPredicted RBP4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 CTCFP49711 727 aaPredicted RBP4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 CLCN3P51790 818 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 ACCSLQ4AC99 568 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 PLEKHA7Q6IQ23 1121 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 GFRALQ6UXV0 394 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 HAPLN4Q86UW8 402 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 WDR63Q8IWG1 891 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 SMAP1Q8IYB5 467 aaPredicted RBP4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 ESX1Q8N693 406 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 ZBTB8BQ8NAP8 495 aaPredicted RBP4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 BBS10Q8TAM1 723 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 DUSP19Q8WTR2 217 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 SLC20A1Q8WUM9 679 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 ST8SIA4Q92187 359 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 SLC41A2Q96JW4 573 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 IFIH1Q9BYX4 1025 aaKnown RBP4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 MMP28Q9H239 520 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 WASH6PQ9NQA3 447 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 ABCF3Q9NUQ8 709 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 SLC13A4Q9UKG4 626 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 PADI1Q9ULC6 663 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 ARHGAP26Q9UNA1 814 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 ZNF711Q9Y462 761 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 CYP46A1Q9Y6A2 500 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 SCN5AQ14524 2016 aa4.02□□□□□ -1.77
RNU6-553P-201ENST00000364047 PRR23AA6NEV1 266 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 C16orf97H3BN30 126 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 FTCDO95954 541 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 F9P00740 461 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 S1PR1P21453 382 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 CPOXP36551 454 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 GNL1P36915 607 aaPredicted RBP4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 USP8P40818 1118 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 PHEXP78562 749 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 PTP4A2Q12974 167 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 FGFBP1Q14512 234 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 GSTA3Q16772 222 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 COL28A1Q2UY09 1125 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 GPATCH4Q5T3I0 446 aaKnown RBP4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 PQLC2Q6ZP29 291 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 HEATR4Q86WZ0 1026 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 TMEM219Q86XT9 240 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 ZNF34Q8IZ26 560 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 RNF113BQ8IZP6 322 aaKnown RBP4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 OR13A1Q8NGR1 328 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 NFKBIDQ8NI38 313 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 MORC4Q8TE76 937 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 ABTB1Q969K4 478 aaPredicted RBP4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 SAAL1Q96ER3 474 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 CDCA5Q96FF9 252 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 CMKLR1Q99788 373 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 PLEKHA5Q9HAU0 1116 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 BRF2Q9HAW0 419 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 KLHL1Q9NR64 748 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 SLC6A13Q9NSD5 602 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 GJD2Q9UKL4 321 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 CAMK2AQ9UQM7 478 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 LOXL2Q9Y4K0 774 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 CEPT1Q9Y6K0 416 aa4.01□□□□□ -1.77
RNU6-553P-201ENST00000364047 FAM172BPA6NC97 362 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 PRSS47A8MTI9 375 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 P2RY10O00398 339 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 FGF17O60258 216 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 EIF3JO75822 258 aaKnown RBP4□□□□□ -1.77
RNU6-553P-201ENST00000364047 ITGA2P17301 1181 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 PDE1BQ01064 536 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 ALG11Q2TAA5 492 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 TMEM95Q3KNT9 176 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 DUS1LQ6P1R4 473 aaKnown RBP4□□□□□ -1.77
RNU6-553P-201ENST00000364047 TRMT1LQ7Z2T5 733 aaKnown RBP4□□□□□ -1.77
RNU6-553P-201ENST00000364047 DSG4Q86SJ6 1040 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 TMPRSS12Q86WS5 348 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 KMT5CQ86Y97 462 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4□□□□□ -1.77
RNU6-553P-201ENST00000364047 C1orf87Q8N0U7 546 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 IL17RCQ8NAC3 791 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 PSMD1Q99460 953 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 MTERF1Q99551 399 aaKnown RBP4□□□□□ -1.77
RNU6-553P-201ENST00000364047 ZFP57Q9NU63 452 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 TMEM30AQ9NV96 361 aa4□□□□□ -1.77
RNU6-553P-201ENST00000364047 ERRFI1Q9UJM3 462 aaPredicted RBP4□□□□□ -1.77
RNU6-553P-201ENST00000364047 RALYQ9UKM9 306 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms