RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 RRADP55042 308 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 GSDMDP57764 484 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 PITX1P78337 314 aaPredicted RBP5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 OTUD4Q01804 1114 aaKnown RBP5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 C1orf61Q13536 156 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 CYTH1Q15438 398 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 MIIPQ5JXC2 388 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 PHF19Q5T6S3 580 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 IYDQ6PHW0 289 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 PLXDC1Q8IUK5 500 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 UBA3Q8TBC4 463 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 ART4Q93070 314 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 TSACCQ96A04 125 aaPredicted RBP5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 SNRNP40Q96DI7 357 aaKnown RBP5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 SLC25A23Q9BV35 468 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 LGR4Q9BXB1 951 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 TMEM168Q9H0V1 697 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 LRRC19Q9H756 370 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 OAS3Q9Y6K5 1087 aaKnown RBP5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 GON4LQ3T8J9 2241 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 A0A1W2PQJ5 194 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 SPTLC2O15270 562 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 ECEL1O95672 775 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 DMPKQ09013 629 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 POLD3Q15054 466 aaPredicted RBP5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 PCOLCEQ15113 449 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 SLC14A2Q15849 920 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 KLHL40Q2TBA0 621 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 CEP135Q66GS9 1140 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 ENPP7Q6UWV6 458 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 STRADAQ7RTN6 431 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 NELFCDQ8IXH7 590 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 D2HGDHQ8N465 521 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 KLC2Q9H0B6 622 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 SUV39H2Q9H5I1 410 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 PLEKHM1Q9Y4G2 1056 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 ICE1Q9Y2F5 2266 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 BOD1L1Q8NFC6 3051 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 ANKUB1A6NFN9 424 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 RHPN2P1A8MT19 583 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 M0QYV0 167 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 SPAG6O75602 509 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 ADCY5O95622 1261 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 HSPA9P38646 679 aaKnown RBP5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 FMO5P49326 533 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 VAV2P52735 878 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 MRPL49Q13405 166 aaKnown RBP5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 NR6A1Q15406 480 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 ERAP2Q6P179 960 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 DENND1BQ6P3S1 775 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 DEFB106AQ8N104 65 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 EHBP1Q8NDI1 1231 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 GRIN3AQ8TCU5 1115 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 KREMEN1Q96MU8 473 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 KLHL32Q96NJ5 620 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 RNF32Q9H0A6 362 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 PCDH12Q9NPG4 1184 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 B3GNT3Q9Y2A9 372 aa5.95□□□□□ -1.46
CDC42SE2-201ENST00000360515 E5RJQ4 531 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 GOLGA8SH3BPF8 625 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 MMP20O60882 483 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 LSM8O95777 96 aaKnown RBP5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 LIG3P49916 1009 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 SMTNL2Q2TAL5 461 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 PPP1R15BQ5SWA1 713 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 PDPK2PQ6A1A2 396 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 XKRXQ6PP77 449 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 CRTC1Q6UUV9 634 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 CIR1Q86X95 450 aaPredicted RBP5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 HID1Q8IV36 788 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 DSELQ8IZU8 1212 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 AOPEPQ8N6M6 819 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 PLA2G15Q8NCC3 412 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 SHC3Q92529 594 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 HMCESQ96FZ2 354 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 PPP1R13BQ96KQ4 1090 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 C19orf43Q9BQ61 176 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 TRIM55Q9BYV6 548 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 MUC3BQ9H195 1237 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 MCCC2Q9HCC0 563 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 TMEM9Q9P0T7 183 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 GULP1Q9UBP9 304 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 HIVEP1P15822 2718 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 KCNN4O15554 427 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 FZD6O60353 706 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 ZNF28P17035 718 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 CMA1P23946 247 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 NUCB2P80303 420 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 CDK3Q00526 305 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 RAD51Q06609 339 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 ZNF789Q5FWF6 425 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 DCAF10Q5QP82 559 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 ABRAXAS1Q6UWZ7 409 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 LRRC31Q6UY01 552 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 ZSWIM9Q86XI8 627 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 RASSF8Q8NHQ8 419 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 NANOS1Q8WY41 292 aaKnown RBP5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 WDR26Q9H7D7 661 aa5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 UPF2Q9HAU5 1272 aaKnown RBP5.94□□□□□ -1.46
CDC42SE2-201ENST00000360515 EXOC1Q9NV70 894 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms