RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TREML1Q86YW5 311 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CPT1BQ92523 772 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 REXO5Q96IC2 774 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SNX27Q96L92 541 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 C1orf21Q9H246 121 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SLC6A15Q9H2J7 730 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 EPB41L4BQ9H329 900 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CRLS1Q9UJA2 301 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 TRHDEQ9UKU6 1024 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 RNF6Q9Y252 685 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ASB14A6NK59 587 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 TNFRSF10AO00220 468 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CDK4P11802 303 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 MYCLP1P12525 358 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 HPCAL1P37235 193 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 E2F2Q14209 437 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 DUS1LQ6P1R4 473 aaKnown RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 KRT78Q8N1N4 520 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF431Q8TF32 576 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 DCAKDQ8WVC6 231 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CANT1Q8WVQ1 401 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 SPATA33Q96N06 139 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 MFHAS1Q9Y4C4 1052 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 FABP12A6NFH5 140 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 MYL9P24844 172 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 SPATA6LQ8N4H0 392 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 SPPL2AQ8TCT8 520 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 SLCO2A1Q92959 643 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 PRDM16Q9HAZ2 1276 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 KIAA1257Q9ULG3 409 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 EDARQ9UNE0 448 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF510Q9Y2H8 683 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 IRGMA1A4Y4 181 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 EFCAB9A8MZ26 197 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 PLA2G6O60733 806 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 PGK1P00558 417 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CD36P16671 472 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 FUT4P22083 530 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 VARSP26640 1264 aaKnown RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CTSKP43235 329 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 MPP1Q00013 466 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CRTC2Q53ET0 693 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 PITRM1Q5JRX3 1037 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 OGFRL1Q5TC84 451 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 SAV1Q9H4B6 383 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 WDR6Q9NNW5 1121 aaKnown RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ACP6Q9NPH0 428 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 DLC1Q96QB1 1528 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CALCAP01258 141 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CKMT2P17540 419 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CAPZA2P47755 286 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 MADCAM1Q13477 382 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 UGT3A1Q6NUS8 523 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 OR10T2Q8NGX3 314 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF606Q8WXB4 792 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 HAPLN3Q96S86 360 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 GPRC5CQ9NQ84 441 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 MCUBQ9NWR8 336 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 MED12LQ86YW9 2145 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ANKRD34BA5PLL1 514 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 H0YAE9 185 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 POU6F1Q14863 301 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 DCAF4L1Q3SXM0 396 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 PPP2R2DQ66LE6 453 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 OR5K1Q8NHB7 308 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 C7orf43Q8WVR3 580 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 C8orf37Q96NL8 207 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 MXRA8Q9BRK3 442 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 MMP27Q9H306 513 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 TNS3Q68CZ2 1445 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CDC42BPGQ6DT37 1551 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF879B4DU55 563 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 TSPAN1O60635 241 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 NCK1P16333 377 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ALDH3A2P51648 485 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 SMIM11AP58511 58 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 MOGSQ13724 837 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 TKFCQ3LXA3 575 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 HMBOX1Q6NT76 420 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CMC1Q7Z7K0 106 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 LPCAT1Q8NF37 534 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 KAZALD1Q96I82 304 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 UBP1Q9NZI7 540 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 PDP1Q9P0J1 537 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 MINPP1Q9UNW1 487 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 SETBP1Q9Y6X0 1596 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 DLG5Q8TDM6 1919 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 FAM155BO75949 473 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CHRNGP07510 517 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CYP19A1P11511 503 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CCR1P32246 355 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 POLD2P49005 469 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 SPIBQ01892 262 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 IKBKEQ14164 716 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 POF1BQ8WVV4 589 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 PPM1MQ96MI6 270 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 RHOJQ9H4E5 214 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CORO2BQ9UQ03 480 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 SIGLEC16A6NMB1 481 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 NUAK1O60285 661 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms