RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 ENPP3O14638 875 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 VAPBO95292 243 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 RBP1P09455 135 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 TMEM253P0C7T8 217 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 VDRP11473 427 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 FUT4P22083 530 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 IDSP22304 550 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CMPK1P30085 196 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 SREBF1P36956 1147 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 HERVK_113P62684 666 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 EEF1A2Q05639 463 aaKnown RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 NAE1Q13564 534 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 PFKFB4Q16877 469 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 ODF4Q2M2E3 257 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 ATXN7L2Q5T6C5 722 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 TMPPEQ6ZT21 453 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 ANKS1BQ7Z6G8 1248 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 ITFG1Q8TB96 612 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 SLC2A14Q8TDB8 520 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 UBE2E3Q969T4 207 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 TMEM176AQ96HP8 235 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CALR3Q96L12 384 aaKnown RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CELF4Q9BZC1 486 aaKnown RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 BTRCQ9Y297 605 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CLCA3PQ9Y6N3 262 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CFAP65Q6ZU64 1925 aaKnown RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CHL1O00533 1208 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 SCO1O75880 301 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 SGPL1O95470 568 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 HMGCRP04035 888 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 HEXBP07686 556 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 OTX2P32243 289 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CTBP2P56545 445 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 PDSS1Q5T2R2 415 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 GRHL3Q8TE85 626 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 PHF10Q8WUB8 498 aaKnown RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 NSMCE2Q96MF7 247 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 MAP3K3Q99759 626 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CDHR5Q9HBB8 845 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 TMEM27Q9HBJ8 222 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 PPRC1Q5VV67 1664 aaKnown RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 FAM135BQ49AJ0 1406 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 SYCP2Q9BX26 1530 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 OR1F1O43749 312 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 SSX5O60225 188 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CBLP22681 906 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 PTPN6P29350 595 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CD151P48509 253 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 ANO7Q6IWH7 933 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CHADLQ6NUI6 762 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CLEC4GQ6UXB4 293 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 TTLL10Q6ZVT0 673 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 KCNMB4Q86W47 210 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CFAP206Q8IYR0 622 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 TMEM145Q8NBT3 493 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 TMEM161BQ8NDZ6 487 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 OR5T1Q8NG75 326 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 HEXDCQ8WVB3 486 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 ATG4AQ8WYN0 398 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 NDNQ99608 321 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 TIPINQ9BVW5 301 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF471Q9BX82 626 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 UCK2Q9BZX2 261 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 SLC6A15Q9H2J7 730 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 IKZF3Q9UKT9 509 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 NDUFAF1Q9Y375 327 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 DNMT3AQ9Y6K1 912 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 SIGLEC1Q9BZZ2 1709 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 ERCC6L2Q5T890 1561 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 KDM6BO15054 1643 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 GLRA3O75311 464 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 UBXN7O94888 489 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 VNN2O95498 520 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CNOT4O95628 575 aaKnown RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CYP1A1P04798 512 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CSH1P0DML2 217 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 CSH2P0DML3 217 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF35P13682 527 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 NDST1P52848 882 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 RPL11P62913 178 aaKnown RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 SMAD3P84022 425 aaKnown RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 RGMBQ6NW40 437 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF554Q86TJ5 538 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 PSTKQ8IV42 348 aaKnown RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 SLC22A9Q8IVM8 553 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 SLC43A3Q8NBI5 491 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 ANKK1Q8NFD2 765 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 NPLOC4Q8TAT6 608 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 PKP4Q99569 1192 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 NDC1Q9BTX1 674 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 NPLQ9BXD5 320 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-203ENST00000357654 BCO2Q9BYV7 579 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 FBRSQ9HAH7 460 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 ERVK-5Q9HDB9 667 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 GMPPBQ9Y5P6 360 aa5.8□□□□□ -1.48
BRCA1-203ENST00000357654 A0A1W2PQ67 120 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 PDCD5O14737 125 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 NUAK1O60285 661 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 USP12O75317 370 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 ENDOUP21128 410 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms